Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00603 ATGGATAAGTACGAGATAGTGAAAGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCTAAATAAAGAAACCAAGGAGCTTGTTGCCATGAAATACATTGAACGAGGTCACAGGATCGATGCCAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTATAATAGTTATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGCATTTGCACTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATACTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGCTATTCTAAGTCATCTCTACTTCATTCAAGGCCAAAATCAACAGTGGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTTACGTAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCCAGAAGATCCAAAGAACTTCAGAAAAACCATAAATCGGATTATGTCTGTTCAATACAAGTTCCCAGAATACGTACACATATCTCAAGACTGTAAACATCTGCTATCGTGCATTTTTGTTGAAAATCCAGCAAAGAGAATAAGCATGAAAGAAATCAAGTCCCACCCATGGTTTCTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTTTACTACAAGAAAGAAAACCCAACATTTTCTCCTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAACTCCACCCTCAGATTCTAAGTCAGCCGGAGAGTTTGGTTGGGGAGAGGAAGGAGAAGAGGAGGAAGAAGACATAACAAATGATGAAGCAAATAGTGAGGAGGAAGAGGAAGATTGTGAAAAGAGAGTCGAGGAGGTACAGACCAGCCACGATGTTAATAAGGTTGTGAGTTGTAACTTCAAGTTAAGAACCAGACAGAGTTTGTGA 1107 0.4219 MDKYEIVKDIGSGNFGVAKLMLNKETKELVAMKYIERGHRIDANVAREIINHRSLCHPNIIRFKEVFLTPTHLIIVMEYAAGGELFDRICTAGRFSEDEARYFFQQLISGVSYCHTLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLLRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTINRIMSVQYKFPEYVHISQDCKHLLSCIFVENPAKRISMKEIKSHPWFLKNLPRELTETAQAVYYKKENPTFSPQSAEDIMKIVEEAKTPPSDSKSAGEFGWGEEGEEEEEDITNDEANSEEEEEDCEKRVEEVQTSHDVNKVVSCNFKLRTRQSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00603 368 MobiDBLite consensus disorder prediction 298 348 - -
Accr5g00603 368 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00603 368 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00603 368 SUPERFAMILY Protein kinase-like (PK-like) 2 289 IPR011009 -
Accr5g00603 368 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Accr5g00603 368 PANTHER SERINE/THREONINE KINASE 3 322 - -
Accr5g00603 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Accr5g00603 368 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Accr5g00603 368 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Accr5g00603 368 CDD STKc_SnRK2 3 259 - -
Accr5g00603 368 Coils Coil 318 338 - -
Accr5g00603 368 MobiDBLite consensus disorder prediction 315 341 - -
Accr5g00603 368 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00603 368 FunFam Serine/threonine-protein kinase SRK2E 80 268 - -
Accr5g00603 368 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00603 Accr-Chr5 28349627 28354359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00603 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.912 1.61e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr5g00603 Pkinase 6.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00603 K14498 - gmx:100809324 575.089