Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00595 ATGGAGAGGAATTTCAGTTCTTATAACCTTCATTGGATCTCTAGCCTGAAGAAAAGTGAGGGAAAACGCCATAATGATCATTCAGAGAAGCCTGATCATCTTAAAGAAGATGATATGTCCCCATCTTTCAATCTACAGAATGTTTCAAAGCTCATCCTTCCACCACTTGGTGCTTCTAGTTATAACCAGAACCCAGTTGAAACCAAAGGGTGGATCATATCTCCCATGGATACAAGATACCGGTATTGGCAGGGTTTGATGGTGCTTCTGGTGGCCTATTCAGCATGGGTTTACCCCTTTGAAGTTGCTTTCCTGCACAGCTCTCCAAATAGGGAAGTGTTCTTAGCGGACAATGTTGTTGATCTTTTCTTCGCTGTTGACATTGTTCTCACATTCTTCGTAGCTTTCATTGATCGGAGAACTCAACTATTGGTAAGAGACTCAAAAAAGATTGCTGTGAGGTACTTGTCAAGTTGGTTCGTGATGGATGTGGCATCAACTATTCCATATGAAGCATTAAGTTATGCAATCACAGGCAAACACAAGGTAGGTCTTGTTTGCTACCTTCTGGGCATGCTTAGATTTTGGCGACTCAGAAGAATGAAGCAATTTTTCACCAGGTTAGAGAAAGACATTAGATTCAGCTACTTCTGGGTCAGATGTGCAAGACTTCTCTTCGTAACACTATTTTCAGTTCATTGTGCTGGGTGCCTCTACTATCTACTAGCTGATCGGCACCCTCACCAAGGACAGACATGGATTGGGGCTGTGATTCCAAATTTCAGAGAGACAAGCCTTTGGATTAGATACATTTCAGCCATGTACTGGTCCATCACCACCATGACCACCGTCGGTTATGGTGACCTCCATGCTGTCAACACTGCTGAAATGATATTCATTATATTTTACATGCTCTTCAACCTTGGCCTCACAGCTTACTTGATTGGTAATATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACTATGGAGTTTAGAAATAGCATTGAAGCTGCATCAAGTTTTGTGGGGCGAAATCGTTTGCCTGCGAGGCTGAAAGAGCAGATTCTGGCCTATATGTGTTTGAGATTTAAGGCAGAAAGCTTAAACCAATATCAGCTTATCGAGCAATTACCCAAGTCCATTTGCACAAGCATCTGCCAGCATCTGTTTTTGCCAACAGTGGAGAAAGTCTATCTTTTCAAAGATGTCTCTAGGGAAATTCTCTTATCCTTGGTTGCGAAAATGAAGGCAGAGTATCTACCACCTAGAGAGGATGTTATTATGCAAAATGAAGCACCAGATGATGTTTACATCATAGTTTCAGGAGAAATAGAGATCATTGATTGTGTAATGGAGAAAGACAAAATTTTAGGAACTTTATATGCGGGTGACATGTTTGGAGAAGTCGGTGCACTTTGTTGCAAACATCAATGTTTTACCTTTAGAACTAAAACTCTCACACAGCTCTTGAGGCTCAAAACCAATGCTCTAATAGAAGCAATGCAAAGTAAAAAAGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAACTAAAAGATTTGAGCATTAGAGATTTAATGGTTGAGAGTGGAGAAGAAGATGATCCAAACATGGCTGTGAATTTATTAACTGTGGCCAGTATCGGCAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACGTGGGAGATTCAAAAGGGAAAACCCCATTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTAAAAGTCTTGCTTAGGCACTCATGCAACATACACATAAGAGACAACAATGGTAACACTGCCTTATGGGATGCCATAGCATCAAAGCATCTCTCCATATTCAGAATCCTCTATCAACTTGCTTGCCTCACTGATCCACAAACAGGAGGTGATCTCCTGTGTACTGCAGCAGAAAGAAATGATCTAACAGTGATGAATGGACTTTTGAAACAAGGATTGAACATAGACTCGAAAGATCGTCATGGTATGACAGCAATCCAAGTAGCCATGGAAGAGAATCATGTGGAAATGGTTCAGCTGCTTGTCATGAATGGAGCAGATGTTTCTGACATACAAACCCATAATTTTTCTGATACTGCTATGAATGAAATGCTGAGAAAGCGCGAGACCGGGCATCAGATCACAGTAGATGAGGCGCCGCCCGGTGAGCATGTAGTAAGGGGAGATGAAGGTGAGCAGGAGGAGCAGAGTTGGGGAAGATCTAGTAAATCAAGCTTCCCAAGAGTGAGTATATATAGAGGCCACCCTATAGACAGAAGAGACGAAAATTGCAAGGAACCTGGAAGACTCATAAGGTTTCCTGATTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAGAAGTTTGGGTTTGAAGCAAAAGATGCGATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCCATTGAAGTGATCAGAGACAATGATAAACTTTTCATTGTTGGGTAA 2499 0.4162 MERNFSSYNLHWISSLKKSEGKRHNDHSEKPDHLKEDDMSPSFNLQNVSKLILPPLGASSYNQNPVETKGWIISPMDTRYRYWQGLMVLLVAYSAWVYPFEVAFLHSSPNREVFLADNVVDLFFAVDIVLTFFVAFIDRRTQLLVRDSKKIAVRYLSSWFVMDVASTIPYEALSYAITGKHKVGLVCYLLGMLRFWRLRRMKQFFTRLEKDIRFSYFWVRCARLLFVTLFSVHCAGCLYYLLADRHPHQGQTWIGAVIPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASSFVGRNRLPARLKEQILAYMCLRFKAESLNQYQLIEQLPKSICTSICQHLFLPTVEKVYLFKDVSREILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEIEIIDCVMEKDKILGTLYAGDMFGEVGALCCKHQCFTFRTKTLTQLLRLKTNALIEAMQSKKEDNIQILKNFLQHFKQLKDLSIRDLMVESGEEDDPNMAVNLLTVASIGNAAFLEELLKAGLDPDVGDSKGKTPLHIAASNGHEECVKVLLRHSCNIHIRDNNGNTALWDAIASKHLSIFRILYQLACLTDPQTGGDLLCTAAERNDLTVMNGLLKQGLNIDSKDRHGMTAIQVAMEENHVEMVQLLVMNGADVSDIQTHNFSDTAMNEMLRKRETGHQITVDEAPPGEHVVRGDEGEQEEQSWGRSSKSSFPRVSIYRGHPIDRRDENCKEPGRLIRFPDSLEELKRIAGEKFGFEAKDAMVTNEEGAEIDSIEVIRDNDKLFIVG 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00595 832 Pfam Ankyrin repeats (3 copies) 551 630 IPR002110 GO:0005515
Accr5g00595 832 Pfam Ankyrin repeats (3 copies) 632 700 IPR002110 GO:0005515
Accr5g00595 832 FunFam Potassium channel SKOR 81 323 - -
Accr5g00595 832 SUPERFAMILY Ankyrin repeat 508 702 IPR036770 -
Accr5g00595 832 Gene3D Jelly Rolls 367 540 IPR014710 -
Accr5g00595 832 Pfam Cyclic nucleotide-binding domain 420 504 IPR000595 -
Accr5g00595 832 SUPERFAMILY cAMP-binding domain-like 327 519 IPR018490 -
Accr5g00595 832 PRINTS EAG/ELK/ERG potassium channel family signature 296 307 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g00595 832 PRINTS EAG/ELK/ERG potassium channel family signature 270 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g00595 832 PRINTS EAG/ELK/ERG potassium channel family signature 117 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g00595 832 PRINTS EAG/ELK/ERG potassium channel family signature 128 137 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g00595 832 PRINTS EAG/ELK/ERG potassium channel family signature 314 323 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr5g00595 832 MobiDBLite consensus disorder prediction 19 38 - -
Accr5g00595 832 SMART ANK_2a 639 668 IPR002110 GO:0005515
Accr5g00595 832 SMART ANK_2a 575 604 IPR002110 GO:0005515
Accr5g00595 832 SMART ANK_2a 608 637 IPR002110 GO:0005515
Accr5g00595 832 SMART ANK_2a 493 525 IPR002110 GO:0005515
Accr5g00595 832 SMART ANK_2a 672 701 IPR002110 GO:0005515
Accr5g00595 832 SMART ANK_2a 543 571 IPR002110 GO:0005515
Accr5g00595 832 ProSiteProfiles KHA domain profile. 759 832 IPR021789 -
Accr5g00595 832 Gene3D - 544 721 IPR036770 -
Accr5g00595 832 ProSiteProfiles cAMP/cGMP binding motif profile. 400 519 IPR000595 -
Accr5g00595 832 MobiDBLite consensus disorder prediction 726 756 - -
Accr5g00595 832 Pfam Ion transport protein 81 329 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr5g00595 832 Gene3D - 83 323 - -
Accr5g00595 832 FunFam Potassium channel KAT2 388 524 - -
Accr5g00595 832 ProSiteProfiles Ankyrin repeat region circular profile. 575 607 - -
Accr5g00595 832 PANTHER POTASSIUM CHANNEL AKT1 45 831 IPR045319 GO:0005249|GO:0006813
Accr5g00595 832 Pfam KHA, dimerisation domain of potassium ion channel 758 830 IPR021789 -
Accr5g00595 832 ProSiteProfiles Ankyrin repeat region circular profile. 672 700 - -
Accr5g00595 832 ProSiteProfiles Ankyrin repeat profile. 639 671 IPR002110 GO:0005515
Accr5g00595 832 ProSiteProfiles Ankyrin repeat profile. 672 704 IPR002110 GO:0005515
Accr5g00595 832 SMART cnmp_10 400 517 IPR000595 -
Accr5g00595 832 SUPERFAMILY Voltage-gated potassium channels 75 323 - -
Accr5g00595 832 MobiDBLite consensus disorder prediction 733 748 - -
Accr5g00595 832 PRINTS Ankyrin repeat signature 576 591 IPR002110 GO:0005515
Accr5g00595 832 PRINTS Ankyrin repeat signature 688 702 IPR002110 GO:0005515
Accr5g00595 832 ProSiteProfiles Ankyrin repeat profile. 575 607 IPR002110 GO:0005515
Accr5g00595 832 CDD CAP_ED 400 513 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00595 Accr-Chr5 28162520 28171886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00595 19 580 Ion Channels AT4G22200 72.438 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00595 K21867 - gmx:100798422 1296.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00595 5 28162520 28171886 Accr5g00595 5 28162520 28171886 ECH