Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00537 ATGGAAGCCAACCACCCCAAGCTTTTGAAGAACAGGCTTGAGCGCCGAAACGCCAAGAAGAACATCGATTACCAAGCTTCCACAACTACGTCATACGACAACGTCGTTTCTCTCGACCTTTTAGGTCAAACCAGCTTCAGGGTAAAAGGTGACGGTGAGTTCGACCTTCTTTTTCGTAGTTTAGGACTTTCTGGTCCCGAAGACTTCGAAATCCCTACTGAGGAATGGAAAGCCCAAGAGGTTCGCCCTATCCATAGTAATAGCAACCCACTGGGTAAAAAGGCACGAGATGAAATTCAAATTTCACCTGAATTTGAACGCCGGTTTGAAATTAATAGTGATATAGAGCTAAAGGGTAAGAACTTTGAACCTGGTGTGGAAAGGAAGGTTACGGTTGCCCATTCTAACTCGAATGCTTTGGGGTCCAATCAAGATGGTGGTAGAGGAATCAGAAGTGTTAGGCCTTCTGTTCTACTGCCGCCGCCGAGGATGGTGCCGAAGCCAATTGCTGATAGGGTTATTGATTCAAGAATTCAAGTTAGGGGCATTAGTTCTGTTGAAGATGAAGTGAGGGTCCCTGAAGGAAATGAGGAGGGTGGTGGTGATGATAAGGGTAGTGATGTGGTTGATGAGTCAGTTCATAATGTCTCACCATATGGGTCATTTAGATGCACTTTCTCCTCTTGGCAAAAGGGAGAGATTCTGGGAAAGGGGTCATTTGGCACAGTTTATGAAGGCTTTACAAGTGATGGGTTCTTCTTTGCCGTGAAGGAAGTTTCTTTGCTGGATCAAGGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATAGCTCTCTTGAGTCGGTTTGAACACAAAAACATAGTTCGATATCTTGGCACAGACAAGGATGAAAGTAATCTATATATCTTCCTCGAGCTTTTAACAAAAGGGTCGTTGGCAAATCTCTATCGAAAGTATCATTTAGTGGATTCACAAGTCTCTGCATACACAAGGCAGATTTTAAGTGGATTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAGTGGATCTGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAATTTAATGATCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAAAGCCATGGTTATGGACCAGCAGCCGATATATGGAGCCTAGGATGTACGGTTTTGGAAATGTTGACACGACGGCCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTGTTTCGGATTGGCAAAGGTGAACCTCCGCCAATTCCTGAATCAATATCAAAAGATGCCCGAGATTTTATTCATAGATGCATACAAGTGAACCCTGAGAAACGGCCAACTGCAGCTATGTTGTTGGAACATACATTCGTAAAGAGAAAATTCATGCCTCCAATAAGTCCTGCTTCTCCGCTTGTTAATGATTTTCGGTCTTGA 1509 0.4347 MEANHPKLLKNRLERRNAKKNIDYQASTTTSYDNVVSLDLLGQTSFRVKGDGEFDLLFRSLGLSGPEDFEIPTEEWKAQEVRPIHSNSNPLGKKARDEIQISPEFERRFEINSDIELKGKNFEPGVERKVTVAHSNSNALGSNQDGGRGIRSVRPSVLLPPPRMVPKPIADRVIDSRIQVRGISSVEDEVRVPEGNEEGGGDDKGSDVVDESVHNVSPYGSFRCTFSSWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSIFQLQQEIALLSRFEHKNIVRYLGTDKDESNLYIFLELLTKGSLANLYRKYHLVDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSHGYGPAADIWSLGCTVLEMLTRRPPYSELEGMQALFRIGKGEPPPIPESISKDARDFIHRCIQVNPEKRPTAAMLLEHTFVKRKFMPPISPASPLVNDFRS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00537 502 Pfam Protein kinase domain 230 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00537 502 SUPERFAMILY Protein kinase-like (PK-like) 211 495 IPR011009 -
Accr5g00537 502 FunFam Mitogen-activated protein kinase 1, putative, expressed 227 494 - -
Accr5g00537 502 SMART serkin_6 229 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00537 502 ProSiteProfiles Protein kinase domain profile. 229 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00537 502 Gene3D Transferase(Phosphotransferase) domain 1 227 494 - -
Accr5g00537 502 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 155 485 - -
Accr5g00537 502 MobiDBLite consensus disorder prediction 137 164 - -
Accr5g00537 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Accr5g00537 502 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Accr5g00537 502 MobiDBLite consensus disorder prediction 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00537 Accr-Chr5 26783218 26789326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00537 12 484 MAP Kinase Kinase Kinase AT4G08500 45.070 1.67e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr5g00537 Pkinase 1.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00537 K13414 - qsa:O6P43_012258 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00537 5 26783218 26789326 Accr5g00537 5 26783218 26789326 CCT
Accr5g00537 5 26783218 26789326 Accr5g00537 5 26783218 26789326 ECH