Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00536 ATGGGTAGATCAGAGGAAGAAGAAGACAAGCAGACGCAGAAAATGGATCTCTCTCTGAAGATTGATCATCATACGTCTGAACCCGTAAAAGCAGATCACGAGGTAGAAGAAGAAGAAGAAGAAGAAGATGATGATAATGATGAGGAAGAAATCGCAAGAGCAGCAAAGGTTGACAAAGAAGAAGAAGAAACTCCTCATGAAGCCGCCATGGCGGCAGAAGATCAGATAGAAGAAGAAGAAGAAAATAATGGATCAATGGTAGAGAACACTAAAGCAAGAGAGGAGCTAAGTTTGTTACAAGTGGAGACAGATCGCATGAAAGAAGAAAACGAAGTTCTAAGGAAAGTGGTGGAGCGAACCATGAAAGACTACTACGATCTTCAGATGAAATTCTCAATCATCCAGCAGAACCACAGCAATAAACACAAGGAGCCTCAGATCTCTCTCTCACTTGAAAACAACAGTAAGGATGATCATATGAAGAAGATTGGATTGGGATTATCTCTGAGGTTAGAGACAAGTGGTACAAACGAAGAAGCAGACCAAGATCATCAATTAGAAGAGTCAAAGTATAATAAGGTATTATTACAAGAATTGACAAGTGTTGGGACATTATTATCATCAGTGCAAAACAAAATACCTCGGACTATTCATCAGCATGAGTCGCCTGGTATCACTAATAATGCTGGCCATGTTGCTTCTTCATCACCTCCAAATAAGAAGTCTAGGGTTTCTGTTCGAGCAAGATGTGAAGCTGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGACAAAAGATTTCCAAAGGGAACCCATGCCCTCGTGCCTATTATCGTTGCACTGTTGCCCATGGCTGTCCCGTAAGAAAACAGGTACAAAGATGCTTAGAGGACATGTCGATACTAATCACAACATACGAAGGAACACACAACCATCCTCTTCCTGTAGGTGCAACAGCCATGGCGTCCACTGCTTATGCTTCTCATTACCAAAACACCAACACCACCTTCCTCCCATCATCATCATCAAACCCTAATCATAATAATATCGACCCTTCGAAAGGACTCGTCCTCGATCTAACCTCATCTTCATCTTCTTCACCGCCCACATTTTCTTGGCCCCCAAACACTACACCCTTCACCAATAATAATATTTTCCCCACTTCTTCTTCTTCTGGGAATCATCATCATCATAATGTGTCTGCGATTGCTTCAGATCCTAAGTTTAGGGTTGCTGTGGCGGCTGCACTAACATCTTTCATTAATAACAAAGACATTAATCATAGTAATAATGTTCACAATAATAATAATGGAAGCTCTGATAGTAGCAACAGCAACAGATGGATCTTAGAGTCCCTCTCATCATCACCAAAAGGGAAAACCCATCAGTTTTAA 1398 0.4113 MGRSEEEEDKQTQKMDLSLKIDHHTSEPVKADHEVEEEEEEEDDDNDEEEIARAAKVDKEEEETPHEAAMAAEDQIEEEEENNGSMVENTKAREELSLLQVETDRMKEENEVLRKVVERTMKDYYDLQMKFSIIQQNHSNKHKEPQISLSLENNSKDDHMKKIGLGLSLRLETSGTNEEADQDHQLEESKYNKVLLQELTSVGTLLSSVQNKIPRTIHQHESPGITNNAGHVASSSPPNKKSRVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAHGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYASHYQNTNTTFLPSSSSNPNHNNIDPSKGLVLDLTSSSSSSPPTFSWPPNTTPFTNNNIFPTSSSSGNHHHHNVSAIASDPKFRVAVAAALTSFINNKDINHSNNVHNNNNGSSDSSNSNRWILESLSSSPKGKTHQF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00536 465 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g00536 465 MobiDBLite consensus disorder prediction 362 400 - -
Accr5g00536 465 MobiDBLite consensus disorder prediction 33 49 - -
Accr5g00536 465 FunFam probable WRKY transcription factor 31 240 317 - -
Accr5g00536 465 Coils Coil 69 109 - -
Accr5g00536 465 MobiDBLite consensus disorder prediction 50 72 - -
Accr5g00536 465 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 438 IPR044810 GO:0003700
Accr5g00536 465 ProSiteProfiles WRKY domain profile. 250 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g00536 465 MobiDBLite consensus disorder prediction 1 32 - -
Accr5g00536 465 MobiDBLite consensus disorder prediction 220 243 - -
Accr5g00536 465 Pfam WRKY DNA -binding domain 256 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr5g00536 465 MobiDBLite consensus disorder prediction 1 90 - -
Accr5g00536 465 Gene3D WRKY domain 240 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr5g00536 465 MobiDBLite consensus disorder prediction 426 447 - -
Accr5g00536 465 MobiDBLite consensus disorder prediction 220 242 - -
Accr5g00536 465 SUPERFAMILY WRKY DNA-binding domain 248 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00536 Accr-Chr5 26738940 26744380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00536 58 348 WRKY Transcription Factor Family AT1G68150 47.249 6.03e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr5g00536 WRKY 7.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00536 - - pcin:129306987 441.81