Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00527 ATGGGGAGCATAAGGAATATGTTGAAAGGGTTAAAATCAGTAGTGTTAATGGTGATGGTACAGATTGCATTAGCAGGAGTGAATTTAGCGTTCAAGTTTGCCATTAACGACGGAATGAGCATGAGGATCGCCACCGCCTACCGCCTTATCTTCGCTTCTGCCTTCACTCTTCCTCTTGCTTTCCTTATTGATAGAAAAAAGAGACCAAAGCTGACTTGGAGGCTGATCTACGTGGCATCCCTTTCTGGCTTGTTTGGGGGAAGTTTAGTGCAAAACCTTTACTTCGAGGCTGTGGCTTTGACATCAGCAACATTAGTTTCTGCCATCTATAACCTTAATTCACCCATCACTTTCATCATGGCTGTCCTACTCGGCTTAGAAAGATGGAATTTGGGAGCGGCAGGAGGGAAAGCAAAGGTATTGGGATCAATACTAGGCATTAGTGGGGCAGCACTTCTTACATTCTTCAAAGGTTTTGAAATTCATATTTGGTCAACACACATAAACCTTTTGCACTCACGATATCATCATGACCAAAACGACACTGCATCGCATGAAAAACATTTCCTAGGTGTTCTCTTTGCCATCTTGAGCTGCTTCTCCTTTGCCTTATGGCTCATAGTTCAGACAAGCATGGGAGTAGAATGTCCAAGCTATCTATTTAGTGCAGCTTTGACTTCTACAATGGGAGCAATGCAAGCCACTTTGTTTGCTCTCTGCATTGAGAGAGATTGGAAAGAATGGAAATTGGGTTGGAATGTCAGGCTTCTCACTGTCTCGTACGCGGGAATTTTTACGTCTGGATTGGTGGTGATTGCAATAGCATGGTGTGTAAAGATGAGAGGTCCAACGTATACATCTATGTTCCAACCTCTAATGCTTGTAATAGTGGCCATGGCTGCTTCTTTGACCTTGAATGAGAAGCTCTATTTAGGAAGTTTGCTTGGAGCATTTCTGATAGTGTGTGGATTGTACATTGTGATATGGGGCAAGAACCAAGAAATGAAAATGAAAGAAGCTGAGATGGAGCATTTAAAAAACACCCAACAACAAGAAGAAAAAGAACCTGAGCCAATTGAAGTTGTCGTGTTCAATAAAGTTCATGATCGCTTTGGGAATAATAATGTTGCAGAGACTACTTCTTCCCAACAAAAGTTGTAG 1161 0.4212 MGSIRNMLKGLKSVVLMVMVQIALAGVNLAFKFAINDGMSMRIATAYRLIFASAFTLPLAFLIDRKKRPKLTWRLIYVASLSGLFGGSLVQNLYFEAVALTSATLVSAIYNLNSPITFIMAVLLGLERWNLGAAGGKAKVLGSILGISGAALLTFFKGFEIHIWSTHINLLHSRYHHDQNDTASHEKHFLGVLFAILSCFSFALWLIVQTSMGVECPSYLFSAALTSTMGAMQATLFALCIERDWKEWKLGWNVRLLTVSYAGIFTSGLVVIAIAWCVKMRGPTYTSMFQPLMLVIVAMAASLTLNEKLYLGSLLGAFLIVCGLYIVIWGKNQEMKMKEAEMEHLKNTQQQEEKEPEPIEVVVFNKVHDRFGNNNVAETTSSQQKL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00527 386 Pfam EamA-like transporter family 14 154 IPR000620 GO:0016020
Accr5g00527 386 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Accr5g00527 386 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016020|GO:0022857
Accr5g00527 386 Coils Coil 335 355 - -
Accr5g00527 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 332 - -
Accr5g00527 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00527 Accr-Chr5 26529410 26535610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00527 11 355 Nodulin-like Gene Family AT1G25270 40.290 6.12e-96 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00527 5 26529410 26535610 Accr5g00527 5 26529410 26535610 CCT
Accr5g00527 5 26529410 26535610 Accr5g00527 5 26529410 26535610 ECH