Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00518 ATGGCAGATGTTTCGAGAGTGGCTGAGGAGTTGAAGCCGGCGTTGTTAATGACGGTGCTTCAGTTGTCATACGCTGCCGCCAATGTTCTGTACAAGCTCGCCGTCAATGATGGCATGAACGTGAAAATCATCATTGCTTATCGCTATATATTCGCCGCCGTTTTCCTTGCGCCAATCGCTCTCTTTCTGGAAAGGAATAAAAGACCAAAGATGACTTGGAGCATACTGTTTCAGGCATTTCTTTGTGGGTTATTTGGAGGAGCACTGTCACAAAACTTTAACTTGGAATCTTTGGCTTTAATTTCTGCAACATTTGTTTCGGCAATGGCCAATCTGACTCCATCCATCACCTTTCTCATGGCCGCCTCCCTCGGTTTGGAAAGACTGAATTTAAAATCAGCAGCAGGACAATTGAAGATCATTGGAACAGCAGTAGCATTAGGTGGGGCCATGACTCTAACATTTTTCAAAGGCACACAAATAAACACAGGATCCTTCCACGTCACCCTCATGCATCATCGTAACGGGCATGTGGCATCACTACTGGCTCCGTCTCCCTTTAAGGCTCTTATGGGAGCCCTTAGTTCTCTAGGAAGCAGTGTTACTTATGCTATATGGCTGATCATTCAGGCTAACATGAGCAAGAGGTACCCATGTTATTACTCAAGCACTGCTTTAATGGCTTCCACATCAGCAATCTTCTCAAGTGGATTTGCTTTTTGCCTTGAGAGAGATTTGACTCAATGGAAGTTGGGTTGGAATGTTAGGCTTCTTACTGTGGCCTTTTCGGGAATTGTTGTTTCTGGAATTATTACGGTGGTAATGGCATGGTGCGTGGGCAAGAAAGGCCCTCTCTATGTCGCTGCTTTCAACCCACTGTTGCTGCTCTTTGTCGCCATGGTTGGTCCTTTTATGTTGGAGGAGAATCTATATCTTGGAAGTATACTAGGAGGGGTGTTGATAGTGTGTGGACTATACATGGTTCTGTGGGGAAAAGCCAAAGAGGTGAAGAACATGAAGCAACTTATTCCGTCACAGAGTAGCCCCCCTGAAATCATACTGAGTTCACCAACAAATGATCATAGAAGCAGCCCTCATAACAACAATCAAGATCATTCAATCATTAATCAACAACGACAAATGAAGTCGAGCCCTGCTGACAAGGAAGAAGCCTAA 1176 0.4473 MADVSRVAEELKPALLMTVLQLSYAAANVLYKLAVNDGMNVKIIIAYRYIFAAVFLAPIALFLERNKRPKMTWSILFQAFLCGLFGGALSQNFNLESLALISATFVSAMANLTPSITFLMAASLGLERLNLKSAAGQLKIIGTAVALGGAMTLTFFKGTQINTGSFHVTLMHHRNGHVASLLAPSPFKALMGALSSLGSSVTYAIWLIIQANMSKRYPCYYSSTALMASTSAIFSSGFAFCLERDLTQWKLGWNVRLLTVAFSGIVVSGIITVVMAWCVGKKGPLYVAAFNPLLLLFVAMVGPFMLEENLYLGSILGGVLIVCGLYMVLWGKAKEVKNMKQLIPSQSSPPEIILSSPTNDHRSSPHNNNQDHSIINQQRQMKSSPADKEEA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00518 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 333 - -
Accr5g00518 391 MobiDBLite consensus disorder prediction 347 391 - -
Accr5g00518 391 PANTHER WAT1-RELATED PROTEIN 13 340 IPR030184 GO:0016020|GO:0022857
Accr5g00518 391 MobiDBLite consensus disorder prediction 347 382 - -
Accr5g00518 391 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Accr5g00518 391 Pfam EamA-like transporter family 12 143 IPR000620 GO:0016020
Accr5g00518 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00518 Accr-Chr5 26204461 26207572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00518 1 339 Nodulin-like Gene Family AT1G68170 39.823 2.39e-85 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00518 - - gmx:100809587 435.261