Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00474 ATGGGTTGTATTTGCTCGAAAGCGAATTCTTCAAATGACTACGTTGCTGAGAACCACGCCAGAGACAAGGATACGAAGGCAAATAGAATCTCAAAACATTTGAGTTCGGGAGAGAAGGTCGCAATAGAGGCTGATGGTAGTGGTAATGATGCGACTACGAGGTTGATATCTAATCCGTCTCGTGATGGAACGCCAGGGTCTACTTCGGTGTCATCAGATGAGGGAGAGAAGAACGGAGAAACAGAAACTACTGCAAAGCCTGCAAAACAGCTGGTTCATATGAGCTCAAACATGGGAATTGGAAATGGAGGACAAGGACAACCCAAGATGGCTAGGATAGTTACTTTACCTAAAGGAGAAAGAGGAGCTCAAGTTCTTGCTGGCTGGCCTTCTTGGCTTACTGCTGTTGCTGGGGAAGCCATTAATGGTTGGATACCTCGTAGAGCAGATTCATATGAGAAGTTGGAGAAGATTGGGCAAGGAACTTACAGCAGTGTTTACAGAGCTCGCGATCTAGAAACAAACAAAATTGTTGCTTTGAAGAAGGTTCGATTTGCTAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGGGAAATTATTGTACTGCGAAGGCTTGATCATCCAAATGTCATGAAACTTGAAGGCATCATTACTTCACGGGTCTCGGGTAGCTTGTATCTTGTTTTTGAATATATGGAACATGATCTTGCAGGGCTTTCAGCAACACCTGGCATCAAGTTCACTGAAGGGCAGATCAAATGTTATATGCAGCAATTGCTTCGTGGTATTGAGCATTGCCACAGTCATGGTGTTCTGCATCGAGATATCAAGGGCTCAAATCTTCTGATTGACAGAAATGGCAATCTAAAAATTGGTGATTTTGGGCTGGCAACTTTCTTTGAGCCTTCTAAGGCTCAGGTTTTGACAAGTCGTGTGATAACCTTGTGGTACCGACCACCTGAACTCCTACTAGGAGCCACAAATTATGGAGTTGCAGTGGACTTGTGGAGTGCTGGTTGCATTCTCGCGGAGTTGTTTACTGGAAAGCCTATAATGCCTGGACGAACAGAGGTGGAACAACTTCACAAAATCTTCAAACTCTGTGGATCACCGTCTGAGGAATACTGGAAGAAGTCGAAGTTGCCACACGCAACAATTTTCAAACCTCAACATCCCTACAAACGGGTTGTTGCTGAGACATTTAAGGATTTTCCTCCATCAGCATTAAGCCTTTTGGAAGTCCTCCTTGCTATTGAACCAGAGGATCGAAGAACTGCTTCTTCAGCGCTTCAGAGTGAGTTCTTTACTACAAAGCCCCTTCCTTGTGATCCTTCAGCTTTGCCAAAATATCCACCAAGTAAGGAGTTTGATGTCAAGTTCCGACAAGAAGAAGCTAGAAGACGTAGAGCTGCAAATAGTAAAGGAAATCCAGAGGAATCAGCTAACAAGGTTTCCAAAGAATCTAAGGCCGTTCCAGCACCTGATGCCAATGCTGAGTTACGGTCGTCAATTGAGAAGAGACAAGGGCTGGCTAACCCTAAATGCATCAGCGAGAAGTTCAATCCTGACGAGGATGGTGGTTTTGGCTTCCCTAACGAACCTTCAAAGACGAGAGCACTCAATGCCTTCTCTCATTCTGGCCAGTCAATGCATCCAAGTGTATATGGATCCTCCCGCGATATGAATTCAAACAAGGAAGAGTCCATTGCTGGCCCTGGCCGTGTCTATAATTCAGGAAATCCTGCAGAGTTGAGAAAACAGAGATCCTACATGAACAAGAATGCTGCCCAATTGTCAAGATTTTCTAATTCAGTTGCTAATGGCGGTGGTTTAAAGCTTGATATGAGTGGAGATGCTAGTGTGAGTTCACAGTGGCCTGATGATTGCTTTGGCACAAGATACGACCATCTAGTTGATGACGAATCCAACCAATTGCTCAAGTCTTTGCACAAGAAGGACACACATCCTTCCGTAAAGGAGCCTTCCAAGGCATTTGCCCCAAAAAACGGTCAAATATACTATTCAGGGCCACTAGTCCCTGGAGGTGAAAATCTTGATGAAATGCTTAAGGAGCATGAAAGGCAAATCCAACAGGCCGTCCGCAAGGAAATCGCTAGCGAGACTTTCAATAGGATGGTGATGACGCTTTTGACTTTGGATGTGAATGGCTGGCTGTATCTGTTTTCTGGAATCTTGACAAACTTTGATGCTGAGAAATAA 2223 0.444 MGCICSKANSSNDYVAENHARDKDTKANRISKHLSSGEKVAIEADGSGNDATTRLISNPSRDGTPGSTSVSSDEGEKNGETETTAKPAKQLVHMSSNMGIGNGGQGQPKMARIVTLPKGERGAQVLAGWPSWLTAVAGEAINGWIPRRADSYEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIVLRRLDHPNVMKLEGIITSRVSGSLYLVFEYMEHDLAGLSATPGIKFTEGQIKCYMQQLLRGIEHCHSHGVLHRDIKGSNLLIDRNGNLKIGDFGLATFFEPSKAQVLTSRVITLWYRPPELLLGATNYGVAVDLWSAGCILAELFTGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRVVAETFKDFPPSALSLLEVLLAIEPEDRRTASSALQSEFFTTKPLPCDPSALPKYPPSKEFDVKFRQEEARRRRAANSKGNPEESANKVSKESKAVPAPDANAELRSSIEKRQGLANPKCISEKFNPDEDGGFGFPNEPSKTRALNAFSHSGQSMHPSVYGSSRDMNSNKEESIAGPGRVYNSGNPAELRKQRSYMNKNAAQLSRFSNSVANGGGLKLDMSGDASVSSQWPDDCFGTRYDHLVDDESNQLLKSLHKKDTHPSVKEPSKAFAPKNGQIYYSGPLVPGGENLDEMLKEHERQIQQAVRKEIASETFNRMVMTLLTLDVNGWLYLFSGILTNFDAEK 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00474 740 FunFam probable serine/threonine-protein kinase At1g54610 139 234 - -
Accr5g00474 740 MobiDBLite consensus disorder prediction 1 15 - -
Accr5g00474 740 Gene3D Transferase(Phosphotransferase) domain 1 240 476 - -
Accr5g00474 740 Coils Coil 683 703 - -
Accr5g00474 740 MobiDBLite consensus disorder prediction 50 74 - -
Accr5g00474 740 Pfam Protein kinase domain 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00474 740 MobiDBLite consensus disorder prediction 16 39 - -
Accr5g00474 740 SMART serkin_6 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00474 740 MobiDBLite consensus disorder prediction 1 109 - -
Accr5g00474 740 ProSiteProfiles Protein kinase domain profile. 152 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00474 740 CDD STKc_CDK9_like 152 436 - -
Accr5g00474 740 SUPERFAMILY Protein kinase-like (PK-like) 145 444 IPR011009 -
Accr5g00474 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Accr5g00474 740 MobiDBLite consensus disorder prediction 547 566 - -
Accr5g00474 740 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Accr5g00474 740 MobiDBLite consensus disorder prediction 547 581 - -
Accr5g00474 740 FunFam probable serine/threonine-protein kinase At1g54610 235 476 - -
Accr5g00474 740 PANTHER CELL DIVISION PROTEIN KINASE 150 442 - -
Accr5g00474 740 MobiDBLite consensus disorder prediction 465 486 - -
Accr5g00474 740 MobiDBLite consensus disorder prediction 465 501 - -
Accr5g00474 740 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Accr5g00474 740 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00474 Accr-Chr5 24905726 24910456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00474 144 472 Core Cell Cycle Gene Families AT5G10270 52.035 4.65e-118 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr5g00474 Pkinase 7.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00474 - - qsa:O6P43_031464 999.193