Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00470 ATGGCGCTGATCCTTCATGCAGGGGAAAAAAATAAAAATGCCTACAAGGCTCTCATTGCCGCTGAGTACAGTGTTGTGGATGTTGAATTGGCCCCAAATTTTGAGGATCCTGTGCTGGAGACACCAGATGGTCCAATTTTTGAGAGTAATGCCATTGCCCGCTATGTTGTTCGATTGAATGGTGACAATGCATTGTATGGATCTTCTTTAATGGACTATGCTCACGTCGAACAGTGGATTGATTTTTCATCATTAGAGATTGATGCGAATATTCTCAGCTGGTACAGACTAAGAATGGGACAAACCACTTACCTTCCTTCTGCTGAGGTAATGAAGGCTGAGGAAGCTGCAATTTCTTCGCTGAAGAGAGCTTTGGGTGCATTGAACACTCACCTTGCTTCTAACAAGTATTTGGTTGAACCTTTTTTTACCCTAGCAGACATTATTATGACATGCAATTTACTTATGGGTTTCACTCAGCTCATGACTAAGAGCTTCACCTCGAAGTTTCCTCATGTTGAGAGATACTTCTGGTCCTTGGTCCATCAACCCAAATTCCGTAAGATTTTAGGTGAGGTTAAGCAGGCTGAAACTGTTGTGGAAGAAAAGCCCAAAGAGGCTGAAGAGGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGGCTTTACTCAAACACCAAGATTATCTTCCCTCGGCTTTACTCAAACCCCAAGACTATCTTCCGTGAGGTTGCAATCGAAGGATTCTGGGACATGTATGACCCTGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACAATGTTTCCTTTGTGACTATGAACAAGGTTGGTGGATTCCTTCAGAGGATGGATCTTGCTCGCAAATATGGCTTTGGGAAAATGCTTGTGATCGGATCTGAGTCACCGTTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATTCCACAATTCGTTATTGACGAATGCTACGACATGGAACTCTATGAATGGAAAAAGGTTGATATCTCAGATGAAGCTCAGAAGGAGCTTATCAGTCAGATGATTGAAGATTGCGAGCCTTTTGAGGGTGAGCCTCTCTTGGATGCCAAATGTTTCAAGTGA 1167 0.4327 MALILHAGEKNKNAYKALIAAEYSVVDVELAPNFEDPVLETPDGPIFESNAIARYVVRLNGDNALYGSSLMDYAHVEQWIDFSSLEIDANILSWYRLRMGQTTYLPSAEVMKAEEAAISSLKRALGALNTHLASNKYLVEPFFTLADIIMTCNLLMGFTQLMTKSFTSKFPHVERYFWSLVHQPKFRKILGEVKQAETVVEEKPKEAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKIIFPRLYSNPKTIFREVAIEGFWDMYDPEGYSLWFCDYKYNDENNVSFVTMNKVGGFLQRMDLARKYGFGKMLVIGSESPFKVKGLWLFRGQEIPQFVIDECYDMELYEWKKVDISDEAQKELISQMIEDCEPFEGEPLLDAKCFK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00470 388 Gene3D - 62 202 - -
Accr5g00470 388 CDD GST_C_EF1Bgamma_like 72 199 - -
Accr5g00470 388 SMART EF1G_2 216 335 IPR001662 GO:0003746|GO:0006414
Accr5g00470 388 FunFam Elongation factor 1 gamma 62 203 - -
Accr5g00470 388 Pfam Elongation factor 1 gamma, conserved domain 216 335 IPR001662 GO:0003746|GO:0006414
Accr5g00470 388 Pfam Glutathione S-transferase, C-terminal domain 99 184 IPR004046 -
Accr5g00470 388 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 64 IPR004045 -
Accr5g00470 388 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 69 200 IPR010987 -
Accr5g00470 388 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 32 243 IPR044628 GO:0004364
Accr5g00470 388 FunFam Elongation factor 1-gamma 1 217 388 - -
Accr5g00470 388 SUPERFAMILY Thioredoxin-like 29 70 IPR036249 -
Accr5g00470 388 MobiDBLite consensus disorder prediction 200 217 - -
Accr5g00470 388 MobiDBLite consensus disorder prediction 200 222 - -
Accr5g00470 388 SUPERFAMILY GST C-terminal domain-like 55 196 IPR036282 -
Accr5g00470 388 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 217 388 IPR036433 GO:0003746|GO:0006414
Accr5g00470 388 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 217 388 IPR001662 GO:0003746|GO:0006414
Accr5g00470 388 SUPERFAMILY eEF1-gamma domain 217 388 IPR036433 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00470 Accr-Chr5 24779438 24782679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00470 1 388 Eukaryotic Initiation Factors Gene Family AT1G57720 63.869 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00470 K03233 - zju:107412556 568.926