Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00469 ATGGCGCTGATACTTCATGCAGGGAAAAATAATAAAAATGCCTACAAGACTCTCATTGCCGCTGAGTACAGTGGGGTGGATGTTAAATTGGCCCCAAATTTTGAGATGGGTGTTTCTAATAAAACTCCTGAATTTCTCAGGTTTAACCCTATTGGCAAGGTTCCTGTGCTGGAAACACCAGATGGTCCAATTTTTGAGAGTAATGCCATTGCCCGCTATGTTGTTCGATTGAATGGTGACAATGCATTGTATGGATCTTCTCTAATGGACTATGCTCACGTTGAACAGTGGATTGATTTTTCGACATTAGAGATTGATGCAAATATTCTCAACTGGTACAGACCAAGAATGGGACGAACCACTTACCTTCCTCCTGCTGAGGAAGCTGCAATTTCTGCACTGAAGAGAGCGTTGGGTGCATTGAACACTCACCTTGCTTCTAACACGTATTTGGTTGGCCATTTTGTGACCCTAGCAGACATTATTATGACATGCAATTTGTTTATGGGTTTCACTCAGCTCATGACTAAGAGCTTCACCTCGGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAATCAACCCAAATTCCATAAGATTTTAGGTGAGGTTAAGCAGGCTGAAACTGTTTTGCCCATACAATCTGCACAGAAGCCCAAAGAAGCTGCTAAGCCTAAGAAAGAAGCTCAACCAAAGAAAGAGGCCCCCAAAGTGGAAGAAAAGCCCAAAGAGGCTGAAGAGGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGTAAGATGATATTGGATGAGTGGAAAAGACTCTACTCAAACACCAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGATATGTATGACCCTGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAGAACACTGTTTCCTTTGTGACTATGAACAAAGTTGGAGGATTCCTTCAGAGGATGGATCTTGCTCGCAAATATGCCTTTGGGAAAATGCTTGTGATTGGATCTGAGCCACCGTTTAAGGTGAAGGGGTTGTGGCTATTCCGTGGGCAAGAAATTCCACAATTCGTTATTGACGAATGCTACGACATGGAACTCTATGAATGGAAAAAGGTCGATATCTCAGATGAAGCTCAGAAGGAGCGTGTCAGTCAGATGATTGAAGATTGCGAGCCTTTTGAGGGTGAGCCTCTCTTGGATGCTAAGTGTTTCAAGTGA 1254 0.4346 MALILHAGKNNKNAYKTLIAAEYSGVDVKLAPNFEMGVSNKTPEFLRFNPIGKVPVLETPDGPIFESNAIARYVVRLNGDNALYGSSLMDYAHVEQWIDFSTLEIDANILNWYRPRMGRTTYLPPAEEAAISALKRALGALNTHLASNTYLVGHFVTLADIIMTCNLFMGFTQLMTKSFTSEFPHVERYFWTLVNQPKFHKILGEVKQAETVLPIQSAQKPKEAAKPKKEAQPKKEAPKVEEKPKEAEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWKKVDISDEAQKERVSQMIEDCEPFEGEPLLDAKCFK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00469 417 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 417 IPR044628 GO:0004364
Accr5g00469 417 SMART EF1G_2 256 364 IPR001662 GO:0003746|GO:0006414
Accr5g00469 417 FunFam Elongation factor 1B gamma 1 74 - -
Accr5g00469 417 CDD GST_N_EF1Bgamma 5 77 - -
Accr5g00469 417 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Accr5g00469 417 SUPERFAMILY eEF1-gamma domain 257 417 IPR036433 GO:0003746|GO:0006414
Accr5g00469 417 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Accr5g00469 417 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 257 417 IPR036433 GO:0003746|GO:0006414
Accr5g00469 417 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 213 IPR010987 -
Accr5g00469 417 Gene3D Glutaredoxin 1 74 - -
Accr5g00469 417 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Accr5g00469 417 FunFam Elongation factor 1-gamma 1 257 417 - -
Accr5g00469 417 Gene3D - 80 217 - -
Accr5g00469 417 CDD GST_C_EF1Bgamma_like 90 212 - -
Accr5g00469 417 MobiDBLite consensus disorder prediction 222 257 - -
Accr5g00469 417 MobiDBLite consensus disorder prediction 217 264 - -
Accr5g00469 417 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Accr5g00469 417 FunFam Elongation factor 1 gamma 80 216 - -
Accr5g00469 417 Pfam Glutathione S-transferase, C-terminal domain 129 197 IPR004046 -
Accr5g00469 417 SFLD Main (cytGST) 5 190 - -
Accr5g00469 417 Pfam Elongation factor 1 gamma, conserved domain 256 364 IPR001662 GO:0003746|GO:0006414
Accr5g00469 417 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 257 417 IPR001662 GO:0003746|GO:0006414
Accr5g00469 417 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00469 Accr-Chr5 24805283 24808228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00469 1 417 Eukaryotic Initiation Factors Gene Family AT1G57720 76.259 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00469 K03233 - zju:107412556 685.641