Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00461 ATGGAACAATCAGAACACACAACCAGTGATCCCAGCCACAACTACCAACAACAACATCGTCAGCTTCAGCATTATCATCAAAATCATCAGTTCCAGTTAGATACGTCGCAGGCTGTGGTCCCTTTCAATGGAGGAGGAGCTCCCTCATGTTTCATCAATGTGGGCCCCACTTCCATCCAAGCTGGCCTCTATGGTCGCGGTGTTGTAACTGCAACTCCTTCCTTGTCACCATCATCATATTCTTGGGCTCCAGTTCCTCTCGTAGCGCCGCTTACCATCGTCGTTCCTGGATCTGATCAGCCACACTCATCTGCACGATCGGGCGGAAATGTGCTCCATCCGATCAGGACACAACAACAAGGTCATCAGCAGCAACAATGGTCGATTTCTGCAGCAACGGCGGGGAGGGATGTTGTAGCTGCATCAACGAACCCCCCACCGCCGAGAACCAGAGATAGACACGTCAAGGTGGATGGTCGTGGCCGGAGAATCCGAATACCAGCAGCTTGTGCGGCTATGATTTTTGAATTAACCAGAGAGCTAGGCCATAGGTCCGACGGAGAGACCATCGAGTGGCTTCTGCGACAGGCGGAGCCGTCAATCATCGCCACCATCGGCACCGGCGTGAGGCCCTCAAACTCCTCAACAACAATCAACCTGCCGTCGCAATGGAACAGTGGTTCTTCCACCGTCTTGGCTCCGCCGTCGATGTCCGCTCCTCATACATCCCATGGAGTTCTACCTGCTCATCAGCATCATCAACTTTATGAGGATCCGTTTCTGCATTCTACCTTGGTAGGGCTGCAGCAGCCTCAGCCTCATCAGCAACAAGAGTATCAACAGCTTCATTTATTGACTTCCGGTCAAATTTCAGAAGCGCTTCCCAATGCTACCGGTGTAGAAGAAGACAACGGAGAACCGACTGACAATTATATGAGAAAACGTTACCGAGAAGATTTATTCAAAGAAGACGCTAACCAACAAGAACAAAGCCAATTTGTAGGTAATGATGATCAGGATTCTTCCATAACTTTCTTACGTGACGTGCAATTGCAGAAAGCTGGATCTTCGAGTTCGAACGTCCTTCGTCGTCCGGCTACCAATCTTCTCCCCACCACCCCTATGTGGGTGGTGCCCAGTGGCATTGATGGCGGCGGCGGAGCCGTGAGTAGCGCATTTTGGATGCTGACCTCCGGGAGTGGAGATGCAGGTGTGGCCTCCGCAGCAGACAGTGGCGGTTCTGTGTTATTTCCGACCGCGCAGACGGGTGGCAGTGATGGAAGCGTGAATCATCACTTTCAAGCAGGCTCGCTGCAATTCATGCCGAGTTCGAATTTGGACCATGGAAGTGTGGAATTTCAAGGTCCGCAACAGGCACCAACGATGTCGTTTGTTGTTCCTAATCATCATCAGATGTTGGATGATCTGTCCAACATGGTGGCTACTGCATTGAATGCGTTTCCTGGTGGTGTTGAAGATGTGAATCTAGTAGACCTTCATCACCATGAAGCTGGTGATAATGGCGACGAAAGTGGTTAA 1539 0.5101 MEQSEHTTSDPSHNYQQQHRQLQHYHQNHQFQLDTSQAVVPFNGGGAPSCFINVGPTSIQAGLYGRGVVTATPSLSPSSYSWAPVPLVAPLTIVVPGSDQPHSSARSGGNVLHPIRTQQQGHQQQQWSISAATAGRDVVAASTNPPPPRTRDRHVKVDGRGRRIRIPAACAAMIFELTRELGHRSDGETIEWLLRQAEPSIIATIGTGVRPSNSSTTINLPSQWNSGSSTVLAPPSMSAPHTSHGVLPAHQHHQLYEDPFLHSTLVGLQQPQPHQQQEYQQLHLLTSGQISEALPNATGVEEDNGEPTDNYMRKRYREDLFKEDANQQEQSQFVGNDDQDSSITFLRDVQLQKAGSSSSNVLRRPATNLLPTTPMWVVPSGIDGGGGAVSSAFWMLTSGSGDAGVASAADSGGSVLFPTAQTGGSDGSVNHHFQAGSLQFMPSSNLDHGSVEFQGPQQAPTMSFVVPNHHQMLDDLSNMVATALNAFPGGVEDVNLVDLHHHEAGDNGDESG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00461 512 Pfam TCP family transcription factor 150 318 IPR017887 -
Accr5g00461 512 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 108 456 IPR005333 GO:0003700
Accr5g00461 512 MobiDBLite consensus disorder prediction 8 24 - -
Accr5g00461 512 ProSiteProfiles TCP domain profile. 150 204 IPR017887 -
Accr5g00461 512 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00461 Accr-Chr5 24686316 24687854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00461 138 401 TCP Transcription Factor Family AT1G72010 37.132 4.26e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr5g00461 TCP 2.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00461 - - pcin:129301586 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00461 5 24686316 24687854 Accr5g00461 5 24686316 24687854 ECH