Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00440 ATGGGTGAACACTTGGGGATTTTGAAAGTCATAGTTGTGCAAGGAAAGCGATTAGTGATTCGGGATTTCAAGAGTAGCGATCCTTATGTTGTGGTCAAGCTAGGAAATCAGACAGCAAAGACTAAGGTGATTAACAGTTGCTTGAACCCGGTTTGGAATGAAGAGCTGAGTTTCACACTGACAGAACCTGTGGGAGTTCTAAATTTGGAAGTATTTGATAAGGATCTTTTGAAGAGTGATGACAAGATGGGAAAGGCCTTCCTCAACCTTCAACCATTAGTCTCTGCAGCCAGAATAAGAAACATTTTACGGGTTTCCTCCGGTGAGACAACAATAAGGAAGCTTGTGCCTGACAGCGAAAACTGCCTTGTTCGAGAAAGCAGTATCAATAGTGTAAATGGTGAGCTGGTGCAAAATATTTGGTTACGGCTTCAAGGAGTCGAATCTGGTGAGCTAGAATTGACCATCAAGTTTATCACTCCCTTGGTGTGA 492 0.4268 MGEHLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFTLTEPVGVLNLEVFDKDLLKSDDKMGKAFLNLQPLVSAARIRNILRVSSGETTIRKLVPDSENCLVRESSINSVNGELVQNIWLRLQGVESGELELTIKFITPLV 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00440 163 Gene3D C2 domain 4 161 IPR035892 -
Accr5g00440 163 CDD C2_ArfGAP 5 150 - -
Accr5g00440 163 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Accr5g00440 163 PRINTS C2 domain signature 46 59 IPR000008 -
Accr5g00440 163 PRINTS C2 domain signature 22 34 IPR000008 -
Accr5g00440 163 PRINTS C2 domain signature 67 75 IPR000008 -
Accr5g00440 163 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 159 IPR044562 -
Accr5g00440 163 Pfam C2 domain 6 100 IPR000008 -
Accr5g00440 163 SMART C2_3c 7 102 IPR000008 -
Accr5g00440 163 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00440 Accr-Chr5 22166727 22170409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00440 1 159 C2H2 Transcription Factor Family AT4G05330 43.396 2.06e-38 132