Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00439 ATGCTGTGTCTTCCTCCGTCGGAGTATATAATGGGTGAACACTTGGGGATTTTGAAAGTCATAGTTGTGCAAGGAAAGCGATTAGTGATTCGGGATTTCAAGAGTAGCGATCCTTATGTTGTGGTCAAGCTAGGAAATCAGACAGCAAAGACTAAGGTGATTAACAGTTGCTTGAACCCGGTTTGGAATGAAGAGCTGAGTTTCACACTGACAGAACCTGTGGGAGTTCTAAATTTGGAAGTATTTGATAAGGATCTTTTGAAGAGTGATGACAAGATGGGAAAGGCCTTCCTCAACCTTCAACCATTAGTCTCTGCAGCCAGAATAAGAAACATTTTACGGGTTTCCTCCGGTGAGACAACAATAAGGAAGCTTGTGCCTGACAGCGAAAACTGCCTTGTTCGAGAAAGCAGTATCAATAGTGTAAATGGTGAGCTGGTGCAAAATATTTGGTTACGGCTTCAAGGAGTCGAATCTGGTGAGCTAGAATTGACCATCAAGTTTATCACTCCCTTGGTGTGA 522 0.4291 MLCLPPSEYIMGEHLGILKVIVVQGKRLVIRDFKSSDPYVVVKLGNQTAKTKVINSCLNPVWNEELSFTLTEPVGVLNLEVFDKDLLKSDDKMGKAFLNLQPLVSAARIRNILRVSSGETTIRKLVPDSENCLVRESSINSVNGELVQNIWLRLQGVESGELELTIKFITPLV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00439 173 CDD C2_ArfGAP 15 160 - -
Accr5g00439 173 Gene3D C2 domain 14 171 IPR035892 -
Accr5g00439 173 SMART C2_3c 17 112 IPR000008 -
Accr5g00439 173 PRINTS C2 domain signature 77 85 IPR000008 -
Accr5g00439 173 PRINTS C2 domain signature 56 69 IPR000008 -
Accr5g00439 173 PRINTS C2 domain signature 32 44 IPR000008 -
Accr5g00439 173 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Accr5g00439 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 169 IPR044562 -
Accr5g00439 173 Pfam C2 domain 16 110 IPR000008 -
Accr5g00439 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 169 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00439 Accr-Chr5 22166727 22171648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00439 11 169 C2H2 Transcription Factor Family AT4G05330 43.396 3.81e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00439 - - pcin:129304892 313.538