Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00422 ATGACGTCGCGTTCGGGGTTTAGCAACAGCACGGTCCGAGTGGGGAAGTACGAGTTGGGTAGGACTTTGGGAGAAGGCAATTTCGCCAAAGTCAAGTTTGCGCGCAACACTGAGACTGGAGAGAATGTGGCCATCAAGATTCTTGGCAAAGAAAAGCTTCTCAAGCACAAAATGATTGGTCAGATAAAACGAGAAATTTCAACGATGAAATTGATTAGACATCCAAACGTCATACGCTTGTACGAGGTCATGGCCAGCAAAACGAAGATATACATTGTATTGGAATTTGTGACTGGAGGGGAATTATTTGATAAAATTGCAAGCAAGGGGAGGTTGAAGGAAGACGAAGCCAGAAAATATTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTTCCATAGAGACTTAAAGCCTGAGAATCTGTTGTTGGATGCTAGTGGAGTACTTAAAGTATCAGATTTTGGATTAAGTGCACTTCCTCAACAAGTCCGAGAAGATGGATTGCTGCACACAACATGCGGTACCCCAAATTATGTTGCCCCAGAGGTGCTCCACAACAAAGGTTATGATGGCGCGAAGGCTGATCTCTGGTCATGTGGTGTTATTCTCTTTGTTCTAATGGCTGGCTTTTTACCTTTTGAAGAAAGAAACCTTGTGGCTTTGTATAAAAAGATATTCAAGGCTGAGTTCACGTGTCCACCATGGTTCTCTTCAAGCGCAAAGAAATTAATCAAGAGAATTCTTGATCCCAATCCTGCTACACGAATTACAATGGCCGAGCTCATTGAGAACGAATGGTTTAAGAAGGGATATATGCCTCCTAGATTTGAGCAGGCCAATGTCAGTCTTGATGATGTAGATGCTATTTTTGGTGATTCAACGGATTCTGAGAATCTTGTGATCGAGAGGCGGGAAGATGGGCCAGCAGCTCCTCTAACTATGAATGCATTTGAGCTCATCTCTACATCCCAAGGCCTCAACCTTAGCAGTCTTTTTGAGAAGCAAATGGGACTTGTAAAAAGGCAAACAAGATTCACATCCAAATGTTCAGCAAACGAGATAATTTCAAAAATTGAGCAAGCTTCAATGCCTTTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTGAAGATTCAAGGGGAAAAGACGGGACGCAAAGGTCATCTTTCTGTAGTAACTGAGGTATTTGAGGTGGCTCCATCTCTTTGTATGGTTGAGATTCGCAAAGCTGGAGGGGATACTTTGGAATTTCACAAGTTCTACAAGAACCTATCCACTGGACTGAAAGACATTGTCTGGAAAGCGGATCCCATTGATGAAGAACCTGATGGTGCGAGAGCATCTGCATAA 1365 0.4271 MTSRSGFSNSTVRVGKYELGRTLGEGNFAKVKFARNTETGENVAIKILGKEKLLKHKMIGQIKREISTMKLIRHPNVIRLYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDASGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVLHNKGYDGAKADLWSCGVILFVLMAGFLPFEERNLVALYKKIFKAEFTCPPWFSSSAKKLIKRILDPNPATRITMAELIENEWFKKGYMPPRFEQANVSLDDVDAIFGDSTDSENLVIERREDGPAAPLTMNAFELISTSQGLNLSSLFEKQMGLVKRQTRFTSKCSANEIISKIEQASMPLGFDVKKNNCKLKIQGEKTGRKGHLSVVTEVFEVAPSLCMVEIRKAGGDTLEFHKFYKNLSTGLKDIVWKADPIDEEPDGARASA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00422 454 FunFam Non-specific serine/threonine protein kinase 313 439 - -
Accr5g00422 454 Gene3D Transferase(Phosphotransferase) domain 1 9 316 - -
Accr5g00422 454 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00422 454 CDD STKc_SnRK3 16 271 - -
Accr5g00422 454 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Accr5g00422 454 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Accr5g00422 454 CDD CIPK_C 320 435 - -
Accr5g00422 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Accr5g00422 454 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Accr5g00422 454 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00422 454 FunFam Non-specific serine/threonine protein kinase 10 312 - -
Accr5g00422 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 428 - -
Accr5g00422 454 Gene3D Kinase associated domain 1, KA1 317 439 - -
Accr5g00422 454 Pfam NAF domain 316 376 IPR004041 GO:0007165
Accr5g00422 454 SUPERFAMILY Protein kinase-like (PK-like) 13 288 IPR011009 -
Accr5g00422 454 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00422 Accr-Chr5 21129755 21141394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00422 2 446 CBL-interacting serine-threonine protein kinases AT1G01140 68.958 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr5g00422 Pkinase 7.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00422 - - gmx:100788746 798.505