Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00414 ATGAAGGTGGAGAACTCAAACGGAGAGATCTATGCCGAAAACAATGGCTCTGAATCCATCGTCAGATTCTCCGATGGTCTTCAGTCGCCAAATTCTGCTATGGCAAAAGGGATTGATGTCGATAAAGATGCGGACGAGATATTCGTTCCTCCTCTGAACTTCGCAATGGTCGACAATGGCATTTTCAGGGCTGGGTTCCCTGATTCTGCCAATTTCGGATTCTTAAAATCTCTTCACCTTCGCTCGGTTATATGTTTGTGCCCTGAACCATATCCAGAAGCGACTTCCGAATTTTTGAAGGCTAATGGAATAAAACTTTATCAATTTGGGATCGATGCCTTCAAGGAACCCTTTGTTAACATCCCAGAGCATACAGTGCGGGAAGCATTGCAAGTAGTCCTTGATGTTAGGAACCACCCTGTGCTAATTCATTGCAAGCGTGGAAAGCATCGCACTGGATGCATTGTGGGGTGCTTAAGGAGATTGCAGAGATGGTGTCTATCATCTGTATTTGATGAGTACCAAAGGTTTGCTGCTGCAAAAGCTAGGGTGTCGGATCAAAGGTTTATAGAATTGTTTGACATTACTAATTTGAAGAACAATCCAATGTCATTTTCATGCTCAAAGAAGTAG 633 0.4329 MKVENSNGEIYAENNGSESIVRFSDGLQSPNSAMAKGIDVDKDADEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLHLRSVICLCPEPYPEATSEFLKANGIKLYQFGIDAFKEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDITNLKNNPMSFSCSKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00414 210 CDD PFA-DSP_Siw14 48 194 - -
Accr5g00414 210 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 195 IPR029021 -
Accr5g00414 210 Gene3D Protein tyrosine phosphatase superfamily 47 197 IPR029021 -
Accr5g00414 210 FunFam probable tyrosine-protein phosphatase At1g05000 47 197 - -
Accr5g00414 210 ProSitePatterns Tyrosine specific protein phosphatases active site. 143 153 IPR016130 GO:0016311|GO:0016791
Accr5g00414 210 PRINTS Plant and fungal dual specificity phosphatase signature 48 65 IPR020428 GO:0016791
Accr5g00414 210 PRINTS Plant and fungal dual specificity phosphatase signature 85 98 IPR020428 GO:0016791
Accr5g00414 210 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Accr5g00414 210 PRINTS Plant and fungal dual specificity phosphatase signature 121 135 IPR020428 GO:0016791
Accr5g00414 210 PANTHER TYROSINE-PROTEIN PHOSPHATASE 48 200 - -
Accr5g00414 210 ProSiteProfiles Dual specificity protein phosphatase domain profile. 53 207 IPR020422 GO:0006470|GO:0008138
Accr5g00414 210 Pfam Tyrosine phosphatase family 49 201 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00414 Accr-Chr5 20807129 20810132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00414 28 210 Protein tyrosine phosphatase (PTP) family AT4G03960 68.852 1.76e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00414 K18045 - gmx:100785520 313.153