Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00375 ATGCAACGAAGGGAAGAAGCCAAGCTTCACGAATATGCCAATGGAATAGAATCTAGGGTTGAGAGTGAATATGTGAAAGCTATTGTTGAGAATGTTTATAGTATAATATTGGACATGGAAGACTTGTTGGTCCCTCAACATCCAGTAGGAGTGGGTAACCGCGTGCAAGAAGTGATTGCAATGCTCCAAAATCATCAATCTGAAGATGTTATCATGGTAGGAATATGGGGAATGGCGGGTATAGGCAAAACAACCATTGCCAAAGCCATTTGTAATAAAATTGGTCAAAGATTTGAAAGTAGAAGTTTCCTTTCAAATATCAGAGAAGTTTGGCATGAAAAATGGGGCGATGTTCACTTACAGAACCAACTTCTTTATGATATATGTAAAACAAAAGGAATGAAGATAAATGATGTTGACTTGGGAAAAAGCGAATTGAGCAAGAGACTTTGCCATAAAAAGGTGTTGGTTGTGCTTGACGATGTGGATAAACTAGCCCAACTGAAAGCTTTGGTTGGAAGTCGTGACTGGTTTCAACGAGGAAGCACAATAATAATCACAACTAGGAATAAACGTCTACTCTCTGAAATGGATTGTCATGTTTATATGGTGAAGAATTTGAATGAAGAGGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAACAAGAAAGTCTTGAAGAAGATTTCATTAAACTTTCAAAAGATATAGTTGCATACTCTGAGGGACTTCCATTTGCTCTTGAAGTCCTTGGCTACTATGTATATGAAAGAGAAATGAAGCAATGGATGAGTGTGTTGGAGAGATTTAAAATGACTCCTGATCACCAAGTGCTACGGAAGCTACAAATAAGCTTTGATTCTTTAGATGATAATGAAAAAGAAATATTTCTAAATATAGTCTTGTTTTATATTGGGGAGGACATGAATGATGTCATACAAAAGTTGGATGCTCGTGGATGTCATGCTAGCATTGGGATGAGAGGCCTAGTGGATAAAAGCCTTGTAACCATCGATGACAACAAAAAAATTAGAATGCATAATTTGTTGCAACTCATGGGAAGAGAAATAATGCGTAAAAGTTCACAAAACGAGTTTCTAAACTCAGGTACGTTATGGTTTTATGAGGATGTATGA 1137 0.3668 MQRREEAKLHEYANGIESRVESEYVKAIVENVYSIILDMEDLLVPQHPVGVGNRVQEVIAMLQNHQSEDVIMVGIWGMAGIGKTTIAKAICNKIGQRFESRSFLSNIREVWHEKWGDVHLQNQLLYDICKTKGMKINDVDLGKSELSKRLCHKKVLVVLDDVDKLAQLKALVGSRDWFQRGSTIIITTRNKRLLSEMDCHVYMVKNLNEEESIELFSWHAFKQESLEEDFIKLSKDIVAYSEGLPFALEVLGYYVYEREMKQWMSVLERFKMTPDHQVLRKLQISFDSLDDNEKEIFLNIVLFYIGEDMNDVIQKLDARGCHASIGMRGLVDKSLVTIDDNKKIRMHNLLQLMGREIMRKSSQNEFLNSGTLWFYEDV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00375 378 Gene3D - 37 206 IPR027417 -
Accr5g00375 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 377 IPR044974 GO:0006952
Accr5g00375 378 SMART AAA_5 69 207 IPR003593 GO:0016887
Accr5g00375 378 Gene3D - 207 290 IPR042197 -
Accr5g00375 378 SUPERFAMILY "Winged helix" DNA-binding domain 278 378 IPR036390 -
Accr5g00375 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 299 IPR027417 -
Accr5g00375 378 Pfam NB-ARC domain 54 271 IPR002182 GO:0043531
Accr5g00375 378 PRINTS Disease resistance protein signature 72 87 - -
Accr5g00375 378 PRINTS Disease resistance protein signature 149 163 - -
Accr5g00375 378 PRINTS Disease resistance protein signature 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00375 Accr-Chr5 19485481 19493630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00375 49 363 WRKY Transcription Factor Family AT5G45050 34.385 1.32e-50 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00375 - - pcin:129288023 388.267