Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00373 ATGGCGTTTCCTGAGAAGCTAACATTCTGGTGGGTACTCTTAGTTGCCATCATGTTGTCCCCATCTCATGTTTCCTCTTTCATGACTTCATCAAACAGTGAAGCAAATGCTTTATTAGAGTGGAAAGCCAGCCTCGACAACCAAAGCCAAGCTCTGCTGTCATCATGGATACATAATAGCAGCCATCCTTGCAAATGGATTGGAATTACATGCAAGGAGTTGAACTCCATTTCCAATATAACTCTTCCAGATTTTGGATTAAGAGGTACGCTTAATAGTCTCAACTTTTCATCTTTCCCCAATCTCCAAGCCTTAGAACTTGGAGGTAATCAATTTATTGGTTCCATTCCCCATGAAATTGGAATGTTAAAGGAACTAGTTTTACTTGACTTGTCAAGCAACTATCTCTTTGGTAACATCCCTACCACTTTAGGGAATATGACCAATTTACATTATCTTTCCCTTTATTCAAACCAATTCTCAGGACCAATCCCACCCTCTATTTGGAACTTGGTCAATCTAAAAGGCCTCACTTTTTATCAAAACAACATTTCTGGATCTATTCCTTCTGAAATTGGAAACTTGACAAAGCTCTCCATGCTATCGTTAGGGCGAAACCTTCTTTTAGGATCTGTTCCTTCTAGTATTGGAAATTTGACAGAGCTCACCTACCTGAATTTGTGTGGAAACAAACTTAGAGGCAATCTTCCTTCAGAAATGAATAGCCTTAGGAAAATGGAATCCTTACAAATCGGAGAAAATTATTTCAAAGGTCATTTCCCTCAAGACATTTGCTTTGGAGGATTACTTGTTAACATCACTGCACATAGGAATCAATTCACTGGTCCAATTCCTAGAACTTTGAAGAATTGCTCTAACCTTATGAGAGTTAGGTTTGAAAGTAATCAACTAACAGGAAATGTCACAGATGCATTTGGTGTATATCAAAACTTAAGATACATTGACTTAAGCAACAATGCACTTTATGGTCACTTGTCACCTACATGGGGGCAGTGCCGTAACCTTGAAAGCCTCAAAATATCTAATAATAACTTATCCGGGGGCATACCGCTAGAACTAAGTGAGGCAACGAAGTTAGATCAACTTGATTTTTCATCAAATCACCTGTCAGGACATATTCCAAAAGAATTGAGTCACTTGTCATCATTGAGTGAACTTATGCTAGACAACAATCAACTCTCAAAAAACATTCCTATTGAGATAGGATTATTGACAAACCTTGATCAGTTGAGTCTAGCTAACAATCATTTAAGTGGCTCAATTCCAGAACAATTTGAAGGGTTGACCAACTTATGGAAATTAAACTTAAGTGGAAATAAGTTCTCAAACCTTCCATCTAGTTTGGGCAAATTACAATATCTTCAATTTCTTGATCTCAGTGCAAATTCCTTTTCTGGTGGAATCCCAATAATGCTTAGAAAGCTACAACAATTGGAAAATTTAAACCTCTCTCATAATAATTTCTCTGGTAAGATTCCCTCTTTTTTTGATGATATGAAAAGCTTGACTATGATTGACATCTCACACAATAAATTAGAAGGTCCACTTCCAAATATTTTTGCCTTTCGTAATGCTTCAATGGAGACATTGAAAGACAACAAAGGTTTATGTGGAAATGTATCTGGCTTGCCAATTTGCCCCACAAGAAGTTACAGTCTCAGGCATCATAAGAGAAACAAATGGGTGATCTATGCTCTATCTCTTGGTTTGGGATCTGTGTTGCTAGCAATAGTTTTGATGGGAATTTCATATATTGTTTGCCATCGCAAAGCAAGTCAAGCAAAAAGTCAAGAGAGAGATGGGAGAACCCAAAATTTGTTTGCTATATGGAGTTATGACGGGAAATTAGTATATGAAAACATTGTTGAAGCCACAGAGGAGTTTGACGAAAAATATCTCATTGGGGCTGGAGGATTTGGAAGTGTTTACAAAGCTGAATTATCCACAGGTCAAGTTGTGGCTGTGAAAAAGTTTCATTCAGTACCAAACAGAAATCAGTGTCAACAAAAAGCATTTGTAAGTGAGATTCGAGCCTTGACAGAAACTAGGCATCATAATATCATCAAGCTATATGGGTTTTGTTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGCAGCTTGGATAAGATACTGAGTGATGAGATGCAAGCAATTGCATTGGATTGGAATAAGAGAATCAAAGTTGTTGAAGGTGTGGCAAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCAATAGTTCATCGTGACATATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCTCACATCTCTGACTTCGGGATGGCCAAGCTTTTGTATCCTGATTCTAACAATTGGACCTCATTTGCTGGTACTTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACCGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATGATGTCTTCTACTGATACACCAATAATGGTTACTCATGATTTTGATTTGAAGGAAGTGTTAGATCAGAGGCTACCTTATCCTCGAGGTTCAATAGCTGAGAAGGTGCTATTGATTGCAAGAATAGGTTTTACTTGCTTGAATGAAAATCCTCGTACTCGCCCATCCATGGAGCAAGTATGCAATGAGCTTGTGGTCCCAAAATCATATGTTTCTGGTTCTATACCATAA 2751 0.3788 MAFPEKLTFWWVLLVAIMLSPSHVSSFMTSSNSEANALLEWKASLDNQSQALLSSWIHNSSHPCKWIGITCKELNSISNITLPDFGLRGTLNSLNFSSFPNLQALELGGNQFIGSIPHEIGMLKELVLLDLSSNYLFGNIPTTLGNMTNLHYLSLYSNQFSGPIPPSIWNLVNLKGLTFYQNNISGSIPSEIGNLTKLSMLSLGRNLLLGSVPSSIGNLTELTYLNLCGNKLRGNLPSEMNSLRKMESLQIGENYFKGHFPQDICFGGLLVNITAHRNQFTGPIPRTLKNCSNLMRVRFESNQLTGNVTDAFGVYQNLRYIDLSNNALYGHLSPTWGQCRNLESLKISNNNLSGGIPLELSEATKLDQLDFSSNHLSGHIPKELSHLSSLSELMLDNNQLSKNIPIEIGLLTNLDQLSLANNHLSGSIPEQFEGLTNLWKLNLSGNKFSNLPSSLGKLQYLQFLDLSANSFSGGIPIMLRKLQQLENLNLSHNNFSGKIPSFFDDMKSLTMIDISHNKLEGPLPNIFAFRNASMETLKDNKGLCGNVSGLPICPTRSYSLRHHKRNKWVIYALSLGLGSVLLAIVLMGISYIVCHRKASQAKSQERDGRTQNLFAIWSYDGKLVYENIVEATEEFDEKYLIGAGGFGSVYKAELSTGQVVAVKKFHSVPNRNQCQQKAFVSEIRALTETRHHNIIKLYGFCWHSKFSFLVYEFLEGGSLDKILSDEMQAIALDWNKRIKVVEGVANASYYLHHGCSPPIVHRDISSKNVILDSDYEAHISDFGMAKLLYPDSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLMMSSTDTPIMVTHDFDLKEVLDQRLPYPRGSIAEKVLLIARIGFTCLNENPRTRPSMEQVCNELVVPKSYVSGSIP 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00373 916 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 244 557 - -
Accr5g00373 916 PANTHER LEUCINE RICH REPEAT KINASE 2 29 206 - -
Accr5g00373 916 ProSitePatterns Protein kinases ATP-binding region signature. 641 664 IPR017441 GO:0005524
Accr5g00373 916 Pfam Leucine rich repeat 461 519 IPR001611 GO:0005515
Accr5g00373 916 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Accr5g00373 916 ProSiteProfiles Protein kinase domain profile. 635 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00373 916 Gene3D Ribonuclease Inhibitor 30 191 IPR032675 -
Accr5g00373 916 Gene3D Ribonuclease Inhibitor 269 359 IPR032675 -
Accr5g00373 916 Gene3D Ribonuclease Inhibitor 431 551 IPR032675 -
Accr5g00373 916 Gene3D Phosphorylase Kinase; domain 1 595 713 - -
Accr5g00373 916 FunFam Leucine-rich repeat receptor protein kinase MSP1 597 713 - -
Accr5g00373 916 ProSitePatterns Tyrosine protein kinases specific active-site signature. 759 771 IPR008266 GO:0004672|GO:0006468
Accr5g00373 916 SUPERFAMILY Protein kinase-like (PK-like) 617 904 IPR011009 -
Accr5g00373 916 Gene3D Ribonuclease Inhibitor 196 268 IPR032675 -
Accr5g00373 916 Gene3D Ribonuclease Inhibitor 361 430 IPR032675 -
Accr5g00373 916 FunFam Nuclear pore complex protein NUP107 31 186 - -
Accr5g00373 916 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Accr5g00373 916 SUPERFAMILY RNI-like 235 531 - -
Accr5g00373 916 SMART LRR_typ_2 219 243 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 435 458 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 411 434 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 482 505 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 147 171 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 506 529 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 387 410 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 315 339 IPR003591 -
Accr5g00373 916 SMART LRR_typ_2 99 123 IPR003591 -
Accr5g00373 916 Pfam Protein kinase domain 637 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00373 916 FunFam MDIS1-interacting receptor like kinase 2 714 910 - -
Accr5g00373 916 Gene3D Transferase(Phosphotransferase) domain 1 714 910 - -
Accr5g00373 916 SUPERFAMILY L domain-like 32 329 - -
Accr5g00373 916 SMART LRR_sd22_2 147 173 - -
Accr5g00373 916 SMART LRR_sd22_2 363 392 - -
Accr5g00373 916 SMART LRR_sd22_2 195 221 - -
Accr5g00373 916 SMART LRR_sd22_2 506 521 - -
Accr5g00373 916 SMART LRR_sd22_2 123 142 - -
Accr5g00373 916 SMART LRR_sd22_2 411 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00373 Accr-Chr5 19410998 19413892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00373 99 807 Receptor kinase-like Gene Family AT4G08850 46.025 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00373 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00373 - - lang:109325563 904.434