Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00346 ATGGCGTGGAGAGAGCTTGGACGAAAGAGAATATATATGAACTTTGCCAGAGCTTTGGCCATAGTTCCATCTAGGCATGTTGCACGGTCGTGTTATTCATCCACCTTTGCAGCAAAATCTGTTTATGCATCTGCAGGATGTTTGACTGAGTTTACCAGTCACCCATCTGCCAGAGCAGCTGGTTTTTGCAACGGAACAATAGAACGTGGAATACAGTACCGGTGGCTCCATGCTAATCCAGAACTATTGGCAAGGAAAAACGACGAGTTATTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAAAATCAACCCCCTGTTGAAGCTCCGTATGTTCCTCGTAATGTGGTCAAATCTACCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTGTTGCTGAGTTGGCAAAGCGTACTGGAAAGTCAGTATCTTCTCTGCAAGATATTCTAGTAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAACTTATTGCAATGGAAGTTGGTGTCAACGTGAAGAGGCTACATTCTACTGAAGGTTCAGATATTTTACCCCGGCCTGCAGTTGTAACAGTGATGGGTCATGTTGACCATGGTAAAACCTCCCTTCTCGATGCTTTGCGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGCATAACTCAGTATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGAGCAAGAGGTGCTGCAGTTACAGATGTAGTGGTACTTGTTGTTGCTGCTGATGATGGTGTGATGCCTCAAACACTTGAAGCTATAGCCCACGCAAAAGCAGCTAACGTACCAGTAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAAAAAGTAAAACTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAACTATGAAAACTGGACTCGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAGTGATGGATCTGAAAGCTCGAATTGATGGCCCTGCCCAAGCTTATGTGGTGGAAGCAAGGCTTGATAGAGGACGGGGTCCATTAGCTACTGCTATTGTGAAGGCGGGGACTCTAGTGTGTGGTCAGCATGTGGTTATAGGTTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACGGGTAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGAACTCCCATGGCTGGTGATGATGTTATTGTAGTTCAGTCAGAGGAGCGAGCACGATTGCTCAGTGCTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTTGAGGAAAGGGCAGATTCTGTGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCCATAGTAGTGAAAGCTGATGTTCAGGGCACCGTTCAAGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCTCAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTGAAGAGTCCACCTGGTCCTGTTAGTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTGCACCGTGTGATTTACCACCTCTTGGAGGAGATGGGCGATTTGATAATTGAGAAGGCTCCAGGGACGTCTGAAACACAGGTAGCCGGGGAGGCAGAGGTGCTGAGTGTATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGCTGCCGGGTTATGGACGGTTGTGTGACAAAATCAGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTGATGTTTGAAGGAAACTGTGCGTCCCTGAGAAGGGAAACGCAGGACGTGGATGCAGTGAAGAAGGGAAGTGAGTGTGGACTGGTAATAAATGACTGGCACGATTTCCAGGTTGGAGATGTCATACAGTGCTTGGAACAAGTGGTGAGAAAGCCCAGGTTCATTAAATCGCAGAGTGGAGCTGTTCGAATTGAGTGTTGA 2172 0.4705 MAWRELGRKRIYMNFARALAIVPSRHVARSCYSSTFAAKSVYASAGCLTEFTSHPSARAAGFCNGTIERGIQYRWLHANPELLARKNDELFGLKTPKKEKRVRRDSKNQPPVEAPYVPRNVVKSTKSVPDKTIEIFEGMTVAELAKRTGKSVSSLQDILVNVGEKVESEFEPLSVDIAELIAMEVGVNVKRLHSTEGSDILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQYLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAIAHAKAANVPVVVAINKCDKPGANPEKVKLQLASEGLLLEEMGGDVQVVEVSATMKTGLDNLEEALLLQAEVMDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVQSEERARLLSAGRKRKYEEDRLKKMVEERADSVESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPGPVSQAAGRANIKIVLHRVIYHLLEEMGDLIIEKAPGTSETQVAGEAEVLSVFELKGRSKSKGPDVKIAGCRVMDGCVTKSGTMRLLRSGEVMFEGNCASLRRETQDVDAVKKGSECGLVINDWHDFQVGDVIQCLEQVVRKPRFIKSQSGAVRIEC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00346 723 Gene3D - 200 374 IPR027417 -
Accr5g00346 723 FunFam Translation initiation factor IF-2 199 374 - -
Accr5g00346 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 372 IPR027417 -
Accr5g00346 723 FunFam Translation initiation factor IF-2 498 605 - -
Accr5g00346 723 NCBIfam translation initiation factor IF-2 130 706 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Accr5g00346 723 FunFam Translation initiation factor IF-2 606 710 - -
Accr5g00346 723 Pfam Translation-initiation factor 2 481 593 IPR023115 -
Accr5g00346 723 Gene3D - 499 603 IPR036925 -
Accr5g00346 723 NCBIfam small GTP-binding protein domain 205 356 IPR005225 GO:0005525
Accr5g00346 723 SUPERFAMILY Translation proteins 376 458 IPR009000 -
Accr5g00346 723 Gene3D Translation factors 605 708 - -
Accr5g00346 723 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 113 718 IPR015760 -
Accr5g00346 723 Gene3D Translation factors 375 493 - -
Accr5g00346 723 SUPERFAMILY Translation proteins 606 707 IPR009000 -
Accr5g00346 723 CDD IF2_mtIF2_II 378 473 IPR044145 -
Accr5g00346 723 Hamap Translation initiation factor IF-2 [infB]. 8 709 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Accr5g00346 723 CDD mtIF2_IVc 611 701 - -
Accr5g00346 723 Pfam Elongation factor Tu GTP binding domain 207 363 IPR000795 GO:0003924|GO:0005525
Accr5g00346 723 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 202 372 IPR000795 GO:0003924|GO:0005525
Accr5g00346 723 CDD IF2_eIF5B 206 369 - -
Accr5g00346 723 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 491 610 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00346 Accr-Chr5 17721988 17725995 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00346 203 687 Eukaryotic Initiation Factors Gene Family AT1G21160 26.978 2.32e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00346 K02519 - qsa:O6P43_014736 1071.61