Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00338 ATGGATGCTCACCGAGACCCTCTAGTGCAAATCAACGACTTCCAGCTTCATGACTTCATTGACGACACCAATTTCGATCAGTTCATCAATTTGCTCCACAGGGAGAATGAACACTCATTCTGTAACTTTGATTCTGACCTTATCAATGTCTACTTAGCTGATACCCAGTTTCTTCCATTACCTGCAAACCCATTTGAGTCTAATAATGCTGTTGTGAATGTTTATGATCCAACCTCTACGCTTAGTTCCTTCTCATGTTTTGATGGAAAAGTGAAGGGAGGAAGAGGAGAAGAAGAGAATGATTCTTCCACTGCGACAACAAACACTACCACTAAAACCACAACGCGTGATAATGCCAAGCACAAGTCCAAAACTGATAGGTCCAAGACTCTGATTTCTGAAAGGAGGAGGAGAGGCTGA 420 0.4238 MDAHRDPLVQINDFQLHDFIDDTNFDQFINLLHRENEHSFCNFDSDLINVYLADTQFLPLPANPFESNNAVVNVYDPTSTLSSFSCFDGKVKGGRGEEENDSSTATTNTTTKTTTRDNAKHKSKTDRSKTLISERRRRG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00338 139 MobiDBLite consensus disorder prediction 115 133 - -
Accr5g00338 139 MobiDBLite consensus disorder prediction 100 114 - -
Accr5g00338 139 MobiDBLite consensus disorder prediction 92 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00338 Accr-Chr5 17527602 17528021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00338 1 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 36.184 1.04e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00338 K26214 - gmx:100805451 151.369