Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00335 ATGGTTGGAGTTTTTTTCCTTATAATCTGCTGGTTTAGAAGGACGTCATTATGGAAAAACAAGTCAAAAGCTCAACAAGATTTTGAGGCCATTCTAAAGAGCCATGGGTCACTTGCCACAAAAAGATATAGCTACTTGGAGATAAAGAAAATGACCCACTGTTTCAAGGAAAAATTAGGGCAAGGAGGCTATGGCAGTGTGTTCAAAGGGAAGTTACATGACAAATGTCCGGTGGCTGTGAAGGTTTTGAAGGAAACAAAAGGTAATGGCGAGGAATTCATGAATGAGGTAGCAAGCATAAGCAAGACTTCTCATGTTAACATTGTCACACTTTTAGGATATTGTTTTGAAGGGTCAAAGAGGGCACTTGTTTATGAGTTTATGACTAATGGATCGTTAGAGAAGTTCATCTTTCAAAATGAAGCTGACCTTGTTGAGGACAATCTTCAGTTGAGTTGTGAGATATTGCACCAAATTGCAGTGGGTGTTGCACGAGGATTAGAGTACTTACATCGAGGATGTAATATTCGGATATTTCATTTTGACATTAAACCTCATAACATTTTATTGGATGAGAATTTCTATCCAAAGATATCAGATTTTGGACTTGCTAAAATATGCCCTAGAAATGAAAGTGTTGTATCCATGTTGGGTGCTAGAGGAACCATAGGATACATTGCTCCCGAGGTAATTTACAGAAACTTTGGTGCCGTCTCTCACAAATCAGATGTTTATAGTTTTGGGATGATGGTTTTGGAGATGGTTGGAGGAAGAAGGAATGCCAATGTCAATGTTGACGACACGAGCGAAATATATTTTCCTCATTGGATATACAAGCGTCTAGAATTAGATGAAGACCTAGCACTTAGGAGCATTAGAAATGAAGGTGACAAGGAAAGGATAAAGCAAATGGTGATAACAAGCTTATGGTGCATACAAACCAACCCTGCAGAGCGTCCAATGATGAATAAAGTGGTGGAGATGCTTGAAGGCAGAGTTGAGACCTTGCAGTTTCCACCAAAACCTTACTTATTTTCTCCTTCAAGATCACCATGCCCTTCCTCTCCCTCAACTTTGATTCCTTAG 1086 0.3932 MVGVFFLIICWFRRTSLWKNKSKAQQDFEAILKSHGSLATKRYSYLEIKKMTHCFKEKLGQGGYGSVFKGKLHDKCPVAVKVLKETKGNGEEFMNEVASISKTSHVNIVTLLGYCFEGSKRALVYEFMTNGSLEKFIFQNEADLVEDNLQLSCEILHQIAVGVARGLEYLHRGCNIRIFHFDIKPHNILLDENFYPKISDFGLAKICPRNESVVSMLGARGTIGYIAPEVIYRNFGAVSHKSDVYSFGMMVLEMVGGRRNANVNVDDTSEIYFPHWIYKRLELDEDLALRSIRNEGDKERIKQMVITSLWCIQTNPAERPMMNKVVEMLEGRVETLQFPPKPYLFSPSRSPCPSSPSTLIP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00335 361 Gene3D Transferase(Phosphotransferase) domain 1 128 337 - -
Accr5g00335 361 ProSiteProfiles Protein kinase domain profile. 53 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00335 361 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
Accr5g00335 361 Pfam Protein tyrosine and serine/threonine kinase 55 329 IPR001245 GO:0004672|GO:0006468
Accr5g00335 361 FunFam PR5-like receptor kinase 128 340 - -
Accr5g00335 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Accr5g00335 361 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 348 IPR045874 GO:0004672
Accr5g00335 361 SMART serkin_6 53 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00335 361 FunFam serine/threonine-protein kinase PBS1-like 18 127 - -
Accr5g00335 361 Gene3D Phosphorylase Kinase; domain 1 24 127 - -
Accr5g00335 361 SUPERFAMILY Protein kinase-like (PK-like) 35 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00335 Accr-Chr5 17346463 17347548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00335 1 344 Receptor kinase-like Gene Family AT4G18250 52.408 2.85e-121 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr5g00335 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00335 - - pcin:129284583 532.332