Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00321 ATGTCAGAAATGCGGGTTTCTGATCTCCACTTGAAGAAGGAGCTCACTCAAATTCGCAAAGCTGCTCGTGTATTGAGGGATCCTGGTACTACTTCTTCGTGGAAGTCGCCACTTAGTTCGTCGAGATCTGTAGCGGCTGCTTCCGCATGGAAGAACAATGGCAACTCTCAACTTCATTCTCAGTTGTCTCTTCCGAGTGGGAGCAACAATGGGAAGGACAAGATGGTGTTCTTGTACAATTGGAAGAATTACAAATCATCGAGTGAGAAACACAATGGCGATGATAAAGACGAAGAAGAAGAGGAGTATGATGAAGATGGTGGTGGAAATGATGGATCTTCGTCTCTTCTGGGGACTTTCGAGGATAGCCTCAGTGATGCTCGCAATGGTTGCGATTCCAAGAGCGATACTTGCTTAGGGGTTGGTGGGAGTGGGATTCGTTCTTCCATTTTCAGGTGTAAAGATGCAAATCCTGTTGCGTTAGGCACGCCATCGACCAGAAGAGCACTGGATATTAAGAAAAAGAGTAAGAAAAGCAAAAATGCCCATTTGGATATTCTAAGAAAATATCAGCAAAGAGAAACCAATCTTGGGCAAGCTTTAGTAAATCCCAAGCATCATTTTCATCGGTCTATAGCTTATAGCCGGGAGGACTCGGTTGGGCAGTCTGATGATACTGAAGATTACTGCAATTCTGAAGATTTAACACGAAACTCAGGACCATCTCCTTTGCTTTTGAAGCTCAAGCATAAGAATTGGTCTCGCCCTAACTCTAAGTTCTTGAAAAGTAATAGAAAAGAGGATTCTTCTTATAGTACTCCTGCAATGTCTACCAGTTCTTATAATAGGTATGGTCAACACAATCCTAGTACCGTTGGATCCTGGGATGGCACGACAACCTCGGTAAATGATGCTGATGATGAAGTAGATGATCTTTTGGATTTGCCTGGTCGCCAAGGATGTGGGATACCTTGCTATTGGTCAAAGAAGACTCCAAAACATCGAGGGATGTGTAGGAGTTGTTATTCACCTTCACTTTCCGACACGCTAAGGAGGAAAGGAAGTAGCATGCTTTGTGGAAGCCAAACTATCTATCCTAGACACCGGAGATCCTTGTCAAGCTCCCACAAGCGGAGAATTTCCTCAAGGAGTGCTCAAGGTGTTCTGCCATTGCTCACTAACAGTGATGATGTTAGAGGGTCATCTCTAGGAACTGGTATGAGTGATGATGAGCTTTCTACAAACTATGGGGAGCTTGATCTTGAGGGCATAAGCAGGTTGGATGGAAGAAGGTGGTCCGCAAGTTGTAGGAGTCAAGAAGGATGGGAGATTGTAGCTTTCAATGGAGAAGGGGATGATGAAGGCACTTCTGAAAATAGTAGGAGTTACAGTCAAAAGTATAAGCCTATGTTCTTTAGTGAATTGATTGGGCAGAATATTGTGGTCCAATCACTTACAAATGCTGTTTCAAGAGGTCGAATTGCATCTGTTTATCTTTTCCAAGGTCCACGTGGGACTGGTAAAACATCAGTGGCCAGGATTTTTGCTGGTGCATTGAATTGTATAACTCCTGATGAAACTAAACCCTGTGGCTACTGCAGGGAATGTGCAAATTTCATTTCTGGGAAGAGCAGGGACCTTTTGGAAGTTGATGGAACCAATAAAAAAGGGATTGATAGAGTTAGACATCTATTGAGAAGATTATCAGTTAGGTCTTCTTCAGCCTCTTCACGATACATGGTCTTTGTTATTGATGAGTGTCATTTGTTACCCTCTAAGACATGGTTGGCATTTCTTAAATCTCTGGAAGATCTACCTCAGCGAGTTGTGTTTATATTTATAACAACAGATCTTGACAATGTGCCACGAACAATACAATCTAGATGCCAAAAGTATCTTTTTAACAAAATTAAAGATGCAGATATAGTAGCACGGCTGAGGAAAATATCTGCTGAGGAGAACCTGGATGTTGAAACAGATGCATTGGATCTTATTGCTATCAATGCAGACGGCTCACTCCGCGATGCAGAAACGATGTTAGAACAGCTGAGTTTGCTGGGAAAAAGAATCACTACTAGTCTTGTCAACGAACTTATGGGGGTTGTTTCAGATGAAAAATTACTAGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGGGCCAGAGAATTGATGGACTCTGGAGTTGATCCAATTGTTTTGATGTCCCAACTGGCAAGCCTCATTATGGACATCATTGCCGGATCATATACTGTTATAGATGACAAACCTGGTGATTCATTTTTTGGCGGACGAAGTTTGAATGAATCGGAGTTGGAGAGATTAAAGCATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAATTAAGGACTTCTAGCGAACGCACAACATGGTTCACAGCTACTCTGTTACAACTTGGGTCAATGCCTTCACCAGATCTTACTCAGACCACCACCAGCAGGAGGCAGAGCAGCAAGACTACTGATGATGATCCATCAAGTGCTTCAAGAGAAGTAACTGCTCACAGGCACAAGTCAGATGTTCAGTGCATGCATCGAAAATCTACATCACCTGCATCTCTGCAGAAAGCTGTGAATAGCAATCCCAGCCACCAAAGGGAGTTATCATCAAAGTTTGATGGTTTCAACCTGAATTCGAAGCCATCAAATTGCCCAGTCATAGATGATGATGCTGCACCTGTTTCATTTGATGATCGTACAGCCAGTAATGTTACATTTAGATGCATAGATTCAGGGAAGTTATGTGATATCTGGGCACATTGTATTGGAAGGTGTCACTCAAAGACATTGAAGCAGCTGCTACTTAATCATGGAAAACTTGTATCCATATGTGAAGTTGAAGGTCTTCTGGTTGCATATGTTGCATTTGGGGATGCAGATATTAAACTCAGGGCTGAAAGGTTTTTGAGCAGCATAACAAACTCCATAGAAATGGTTTTGAGACGAAATATAGAGGTCAGAATAATCCACTTGCTTGATGGTGAAGGTGAAGATCAGATCAATCTATCAGACCCGAAACAGCCAGAATCAATAATAGCAAATGAGAAGGAACATAGACAAGGTCATACAAGAGGAATAGACACTTTCTCAGATTTTCCTGCTTTGCTGGGTGGAAATTTGCAATCTACCAATGATTCGTCAGATTTATTGGTTGATGGAAATGGTGTAAGAGAGAGATCAGATATTCCAATGCAAAGGATTGAATCCATTATTCGTGAGCAGAGGCTGGAAACTGCTTGGTTACAGGCTGTAGGAAAAGGCTCCCCAGGATCTTTAAGTCGCTTAAGACCTGAAAAGAATCAGGTCCTACCTCAGGAAGGTATCTACTGTAAAGAACCAACAGAGTCCATGGACTCAACGAGGTTCTCCTCTCAGCATAGGGAAGATGGCATCAATCATGAAGTCAAAGTTTTGAAAGCTAAAAATGAAAGGGTCCTACAGAAGGATCAGATTGGAATTGGAAGAAGGGCGGACTGTTACTCCATGTCCCCTAGTTTATTGCACAATGGCAGTTTAGTAGGGACTTCGATCAAAGAGAGTCTGGGATATGAATCAGGAGCAGGAGCTAGAGGTTGTAGTGGATTTTTGTGTTGGAACAACTCCAGCCGTAGAAGGGTAAAGGTAAAAGGTACCCCAGTGCGGAAAGTGGGACGCTATTCATTGTTTGGCGAGTGTGGTAAGCCGAAGAAAAAGAGCTGA 3735 0.426 MSEMRVSDLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASAWKNNGNSQLHSQLSLPSGSNNGKDKMVFLYNWKNYKSSSEKHNGDDKDEEEEEYDEDGGGNDGSSSLLGTFEDSLSDARNGCDSKSDTCLGVGGSGIRSSIFRCKDANPVALGTPSTRRALDIKKKSKKSKNAHLDILRKYQQRETNLGQALVNPKHHFHRSIAYSREDSVGQSDDTEDYCNSEDLTRNSGPSPLLLKLKHKNWSRPNSKFLKSNRKEDSSYSTPAMSTSSYNRYGQHNPSTVGSWDGTTTSVNDADDEVDDLLDLPGRQGCGIPCYWSKKTPKHRGMCRSCYSPSLSDTLRRKGSSMLCGSQTIYPRHRRSLSSSHKRRISSRSAQGVLPLLTNSDDVRGSSLGTGMSDDELSTNYGELDLEGISRLDGRRWSASCRSQEGWEIVAFNGEGDDEGTSENSRSYSQKYKPMFFSELIGQNIVVQSLTNAVSRGRIASVYLFQGPRGTGKTSVARIFAGALNCITPDETKPCGYCRECANFISGKSRDLLEVDGTNKKGIDRVRHLLRRLSVRSSSASSRYMVFVIDECHLLPSKTWLAFLKSLEDLPQRVVFIFITTDLDNVPRTIQSRCQKYLFNKIKDADIVARLRKISAEENLDVETDALDLIAINADGSLRDAETMLEQLSLLGKRITTSLVNELMGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPIVLMSQLASLIMDIIAGSYTVIDDKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERTTWFTATLLQLGSMPSPDLTQTTTSRRQSSKTTDDDPSSASREVTAHRHKSDVQCMHRKSTSPASLQKAVNSNPSHQRELSSKFDGFNLNSKPSNCPVIDDDAAPVSFDDRTASNVTFRCIDSGKLCDIWAHCIGRCHSKTLKQLLLNHGKLVSICEVEGLLVAYVAFGDADIKLRAERFLSSITNSIEMVLRRNIEVRIIHLLDGEGEDQINLSDPKQPESIIANEKEHRQGHTRGIDTFSDFPALLGGNLQSTNDSSDLLVDGNGVRERSDIPMQRIESIIREQRLETAWLQAVGKGSPGSLSRLRPEKNQVLPQEGIYCKEPTESMDSTRFSSQHREDGINHEVKVLKAKNERVLQKDQIGIGRRADCYSMSPSLLHNGSLVGTSIKESLGYESGAGARGCSGFLCWNNSSRRRVKVKGTPVRKVGRYSLFGECGKPKKKS 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00321 1244 FunFam DNA polymerase III subunit gamma/tau 638 700 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 87 119 - -
Accr5g00321 1244 CDD AAA 476 634 - -
Accr5g00321 1244 SMART AAA_5 494 656 IPR003593 GO:0016887
Accr5g00321 1244 MobiDBLite consensus disorder prediction 256 303 - -
Accr5g00321 1244 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 464 862 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 29 48 - -
Accr5g00321 1244 Pfam DNA polymerase III, delta subunit 477 637 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 25 48 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 214 243 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 267 302 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 814 828 - -
Accr5g00321 1244 CDD HLD_clamp_pol_III_gamma_tau 637 700 IPR045085 -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 857 879 - -
Accr5g00321 1244 Gene3D - 453 635 IPR027417 -
Accr5g00321 1244 Gene3D - 638 700 - -
Accr5g00321 1244 MobiDBLite consensus disorder prediction 814 879 - -
Accr5g00321 1244 FunFam DNA polymerase III subunit gamma/tau 458 636 - -
Accr5g00321 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 687 IPR027417 -
Accr5g00321 1244 Pfam DNA polymerase III subunits gamma and tau domain III 691 809 IPR022754 GO:0003887
Accr5g00321 1244 Coils Coil 773 800 - -
Accr5g00321 1244 NCBIfam DNA polymerase III subunit gamma/tau 462 811 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Accr5g00321 1244 SUPERFAMILY post-AAA+ oligomerization domain-like 708 809 IPR008921 GO:0003677|GO:0006260
Accr5g00321 1244 MobiDBLite consensus disorder prediction 829 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00321 Accr-Chr5 16300983 16308564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00321 458 760 Core DNA Replication Machinery Family AT1G21690 23.718 1.81e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00321 - - gmx:100814391 1667.9