Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00318 ATGGCTTCATCTTCAACATCGACGACAGGGAGGAAGGAGAAAGCGAGAAGGAAGGGGAATAAAGCAGACCCAAGGACGAGAGCGGCCTCAAAAAGGCGAGGAATCGAGATAACCTCTATTTCTAGGCCAATCCAACCATCTGATTTCCGAGAGTTTGATCTTATTCTTGCTATGGACAAGCAAAACAGAGAGAACATATTAGAGGCATCAATAGATGGAAGTTTAGAGATACTTTGCCCGCTGATGCATATAAGAAGGTTAAATTGA 267 0.4345 MASSSTSTTGRKEKARRKGNKADPRTRAASKRRGIEITSISRPIQPSDFREFDLILAMDKQNRENILEASIDGSLEILCPLMHIRRLN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00318 88 PRINTS LMW phosphotyrosine protein phosphatase signature 51 66 IPR017867 GO:0004725|GO:0006470
Accr5g00318 88 PRINTS LMW phosphotyrosine protein phosphatase signature 18 34 IPR017867 GO:0004725|GO:0006470
Accr5g00318 88 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 18 69 - -
Accr5g00318 88 MobiDBLite consensus disorder prediction 10 32 - -
Accr5g00318 88 SUPERFAMILY Phosphotyrosine protein phosphatases I 17 78 IPR036196 -
Accr5g00318 88 Pfam Low molecular weight phosphotyrosine protein phosphatase 18 72 IPR023485 -
Accr5g00318 88 Gene3D - 2 82 - -
Accr5g00318 88 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00318 Accr-Chr5 16174463 16175022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00318 17 69 Protein tyrosine phosphatase (PTP) family AT3G44620 75.472 5.06e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00318 K25307 - jre:109008761 92.8189