Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00308 ATGGCTTCCTCGGCCACCGACATTGTGTGCGTCACCGGCGCCAACGGCTTCATCGGCTCGTGGTTGGTCCAAACCCTCTTGCAAAACCCTCGCTACGCCTCCATACATGCTTCCATATTCCCCAATTCCGACGCCTCTCACCTCTTCGAACTCCAACCTGACGCCAAATCCCGAATCAAACTCTTCGAGGTCGATGTGCTCGACGCCGCCGCAGTCACCCGTGCTGTCGACGGTTGCTCCGGCGTGTTCCATGTAGCATCCCCTTGTACCCTCGAAGACCCCGCCGACCCACAGAAGGAACTCGTGCTTCCGGCGGTACAGGGCACTCTGAATGTTCTAGAGGCAGCTAAGAAGTGCAACGTGAAGCGTGTTGTCCTCACTTCCTCTATTTCCGCGATGGTCCCAAATCGTAATTGGCCTCCAAACAAGTCCTTCGATGAGTCCTCTTGGACCGACCTCGATTACTGCAAATCGAGGGCTAAATGGTACCCAGTGTCGAAGACGCTCGCGGAGAGAGGCGCGTGGGATTACGCGGAGAAGAATGGCATTGACATGGTGGCGATTAATCCTGCGACATGTTTGGGTCCTTTGCTTCAGAATTCGCTGAATGCTAGTAGTGCCGTGCTTCAACAATTGCTTGAAGGCTCAAAGGATACGCAGGAGTATCACTGGCTTGGAGCTGTGCATGTGAAGGATGTGGCCAAAGCGCATGTATTACTGTTTGAAAGCCCAAATGTTTCTGGTAGATATCTTTGTACCAATGGCATCTATCAGTTTTCAGATTTTGCAAACAAAGTGTCCAAGCTATATCCTGATTTCCCTGTTCACAGGTTCCCTCCAGAAACTCAACCAGGGTTGGTAGCATGTGAAGATGCTGCGAAGAAGTTAATAGACTTGGGATTGGTGTTCACTCCTCTTGAAGATGCTGTACGAGAAGCAGTGGACAGCCTTATATCTAGAGGATTCCTTCACCATAAATCCTAG 984 0.5122 MASSATDIVCVTGANGFIGSWLVQTLLQNPRYASIHASIFPNSDASHLFELQPDAKSRIKLFEVDVLDAAAVTRAVDGCSGVFHVASPCTLEDPADPQKELVLPAVQGTLNVLEAAKKCNVKRVVLTSSISAMVPNRNWPPNKSFDESSWTDLDYCKSRAKWYPVSKTLAERGAWDYAEKNGIDMVAINPATCLGPLLQNSLNASSAVLQQLLEGSKDTQEYHWLGAVHVKDVAKAHVLLFESPNVSGRYLCTNGIYQFSDFANKVSKLYPDFPVHRFPPETQPGLVACEDAAKKLIDLGLVFTPLEDAVREAVDSLISRGFLHHKS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00308 327 FunFam Cinnamoyl-CoA reductase 1 2 327 - -
Accr5g00308 327 Pfam NAD dependent epimerase/dehydratase family 9 245 IPR001509 -
Accr5g00308 327 CDD FR_SDR_e 9 301 - -
Accr5g00308 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 313 - -
Accr5g00308 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 317 IPR036291 -
Accr5g00308 327 Gene3D - 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00308 Accr-Chr5 15805897 15810694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00308 5 323 Monolignol Biosynthesis Gene Families AT2G02400 67.398 2.07e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00308 - - qsa:O6P43_012099 507.679