Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00235 ATGGATAATGGGGATCTTGATGGCAGTGGAGAAGATGAGTTTCATGGGCAGAGGGGTCGCAAGTACCGACCCGTGTTGGACAACGATCGTGCTGTACTTGAAATGTCTTCCATGGATCCTGGATCGTCGTCGTCCTCTTATCCTGCTTCTCTCAAAAATATTAATGTAAATGCGAGTGCAAATGTGGGTTCTGATGCAAAAGAAGGGAACTCTCCTCGTCATGCACAGGCTAATGGAATGCAGGGGGAATCCAAATTGGAATTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGGCTCAAAAGTATGATTGGAGAGCAGCTTCAACAGCCATCTAGTCCAAGAGATGGTGAGAATATTTCCATCACAGTGGGGCAGCCTAGGCCTGCAGGCCCCCAATTGGGAACATTGATGGGTGTGTTCATTCCGTGCTTACAAAGCATATTGGGAATTATCTATTACATTCGTTTCTCATGGATTGTTGGTATGGCTGGCATAGCAGAGTCATTGTTACTTGTTACTCTATGTGGCTCCTGTACTTTTCTCACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGGGTTAGCATTGGTCTTTGTTTCTTTCTGGGGAATGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAAAGCAGTGCCTAGAGCTGGGATTTTTGGAGAGACTATCACTCAAGTTAATGGTACTGCCGTTGCAGAACCAATACACGTTATAAGTTCTCATGACATGCAAATTTATGGAATTGTTGTAACTATTGTATTATGCTTTATTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCACCTGCTTTTCTTATACCTGTTTTGTTCTCGCTGATCTGCATATTTCTGGGGATCTTCTTGGCAAGAAAGGATAAGCCTGGAGAGGGAATCACAGGACTGAGTTTGGAGACATTTAAAGAAAATTGGAGTTCAGAGTATCAAAAGACTGATGCCAATGGAATTCCAGATCCTGATGGATCTGTAAGCTGGGGTTTTAATTCATTGGTTGGGCTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCAAATCGATCATCATCTCTGAAAGATACTCAGCGTTCAATTCCTGTTGGAACCTTAGCTGCTACTCTTTCGACGACTTCTATGTACCTGATTACTGTTTTCTTGTTTGGTTCTGTTGCAACCAGAAACAAGCTATTAACAGATAGGCTACTCACGGCTACCATTGCCTGGCCTTTTCCATCATTAATCAAAATTGGGATTATTCTTTCAACTCTGGGTGCTGCTCTTCAGAGCTTGACAGGGGCCCCCCGTTTGCTTGCAGCAATAGCCAATGATGATATATTACCTGTTCTTAACTACTTCAAAGTTGTGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACGGCTTTCCTCTGTATTGGGTGTGTCGTAATTGGGAATCTGGATCTTATCACTCCAACAATAACTATGTTCTTCCTTCTATGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGTTGGCGTCCTCGATGGACTTTTCACCATTGGAGCTTGTCTCTTTTTGGTGCATTACTTTGTGTAGTTATCATGTTCCTGATCTCTTGGTCATTCACTGTGGTGTCTTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGTATCCAAGGAAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAACTAGCACTTCGCAGCCTTAGGTCTCTTGGAGCAAACCAGGTGCACCCAAAGAATTGGTATCCGATCCCTCTAATATTCTGCCGGCCTTGGGGAAAACTGCCAGAAAATGTACCTTGCCATCCCAAACTAGCAGACTTCGCCAACTGCATGAAAAAAAAAGGTAGAGGAATGTCCATATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCCGAAGATGCCAAGGTTGCTTGCAGACAACTAAGTACCTACATTGATTACAAGAATTGCGAAGGTGTTGCCGAGATAGTTGTAGCCCCCAATATGTCAGAAGGCTTTCGTGGTATTATACAGACTATGGGCCTTGGCAATCTTAAGCCAAACATCGTCGTGATGCGTTATCCAGAAATATGGCGACGTGAGAACTTGACAGAGATCCCGGCAACCTTTATTGGGATAATTAACGACTGCATCGTAGCAAACAAAGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTACGGTACGATTGATTTGTATTGGATTGTGAGAGACGGTGGTTTAATGCTTCTTCTCTCCCAGCTTCTTCTCACAAAGAACAGCTTTGAGAGTTGCAAGATTCAAGTTTTTTGCATTGCGGAAGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTGAAGAAGTTTCTCTATGATCTTCGGATGCATGCAGAAGTCTTTGTCATAACAATGAAATGGGATGCACAAACAGATGGCGCTGAGTCTCAGCAAGATGAATCATACGAGGCATTTACGAGCGCGCAGCGAAGAATCAGTGGTTACTTAGCTGAATTGAAGGCAAAAAAGCGGGACGATGCCCCTCTGATGGCTGACGGTAAGCCAGTGGATGTGAATGAGAATCAGGTGGAGAAATTCCTTTACACAACATTGAAGCTGAATTCGATAATGCTGAAGTACTCAAGAATGGCAGCAGTTGTGCTGGTCAGCCTCCCTCCACCTCCATTGAACCACCCTGCTTATCTCTATATGGAGTATATGGATCTGTTGCTGGAGAAGGTACCCAGGATTTTGATTGTAAGAGGATATCATAGAGATGTTGTGACTCTATTCACATAG 2943 0.4397 MDNGDLDGSGEDEFHGQRGRKYRPVLDNDRAVLEMSSMDPGSSSSSYPASLKNINVNASANVGSDAKEGNSPRHAQANGMQGESKLELFGFDSLVNILGLKSMIGEQLQQPSSPRDGENISITVGQPRPAGPQLGTLMGVFIPCLQSILGIIYYIRFSWIVGMAGIAESLLLVTLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPRAGIFGETITQVNGTAVAEPIHVISSHDMQIYGIVVTIVLCFIVFGGVKMINRVAPAFLIPVLFSLICIFLGIFLARKDKPGEGITGLSLETFKENWSSEYQKTDANGIPDPDGSVSWGFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLSTTSMYLITVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVVDGSEPHLATLFTAFLCIGCVVIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWTFHHWSLSLFGALLCVVIMFLISWSFTVVSLALASLIYKYVSIQGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKVACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFIGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKNSFESCKIQVFCIAEEDADAEVLKADVKKFLYDLRMHAEVFVITMKWDAQTDGAESQQDESYEAFTSAQRRISGYLAELKAKKRDDAPLMADGKPVDVNENQVEKFLYTTLKLNSIMLKYSRMAAVVLVSLPPPPLNHPAYLYMEYMDLLLEKVPRILIVRGYHRDVVTLFT 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00235 980 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 109 977 IPR004842 GO:0006811|GO:0015377|GO:0016020
Accr5g00235 980 Gene3D Amino acid/polyamine transporter I 133 596 - -
Accr5g00235 980 NCBIfam K-Cl cotransporter 70 980 IPR004842 GO:0006811|GO:0015377|GO:0016020
Accr5g00235 980 Pfam Amino acid permease 139 614 IPR004841 GO:0016020|GO:0055085
Accr5g00235 980 MobiDBLite consensus disorder prediction 8 28 - -
Accr5g00235 980 MobiDBLite consensus disorder prediction 1 50 - -
Accr5g00235 980 Pfam Solute carrier family 12 781 979 IPR018491 GO:0006811|GO:0016020|GO:0022857
Accr5g00235 980 Pfam Solute carrier family 12 649 770 IPR018491 GO:0006811|GO:0016020|GO:0022857
Accr5g00235 980 FunFam Cation-chloride cotransporter 1 133 597 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00235 134 980 Inorganic Solute Cotransporters AT1G30450 83.137 0.0 1450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00235 K14427 - gmx:100795205 1624.76