Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00213 ATGGCGGCCGCTTCTTCTTCCTCTGATGATTCTCAAATAAAACACGATGTGTTCATCAGTTTCTGTGGCAAGGACACAAGACGTGGTTTTCTGAGCCATCTCGTAAAGGAACTACGCCGGGAGAAAATTATAGTCTTTGTAGATGAGAATCTAAACAGAGGAGAAGGAATATCATCCTCGCTCCGCAGAGCGATTCAAGAATCGCAAATTTCAATCGTCATATTCTCAGAAAACTATGCCTCTTCATCGTGGTGCTTGGATGAGCTTGCAGAAATAATTAAGTGCGTGAAAGTGAACAAACAAATTGTTTTGCCTGTTTTCTACTGCATAGACCCTTCACATGTACGACATCAGAAAGGCACTTACGAGAATGCTTTTGCTGACCATGAATTGAAGTTTCAAGGAAATGGCTTGAAGGTCCAAAATTGGAGATCAGCCTTGAAGAATGCTGCTGACCTATCTGGCTATGTTTCTTCCATTTATGATAATGACTCTGAGCTCATCGATGAAATCGTCAAATATGTTTTGTCAAGACTGGAAGATGTTTTGTTAAGCCTGGATCATATCTATCCTAATGAATCAGAAGGCCTTGTTGGAATTGATCAACAGCTTTATCATATCAGATCATTTTTGGAAATGAAGACAAAAGAAGTTCAAATCCTTGGAATTTGGGGCATGAGTGGCATAGGTAAAACAACCATTGCACAAGTTGCATATGACAAATTCTCTTCCCACTATGAAGGCTCTTGCTTTATAGACAATGTGAGAGAAGAATCACAAAATCATAGCCTGAAATATTTAAAAAAGAAACTTATTTCTGAACTGCAAGAGGAAAATTCCACTTTTGTTCACATAGGGTTTATTAGTCGAAGAAAAGTTCTCGTCGTGCTTGATGATGTGGGTACTCTGGAACAACTACAGTATCTGGTTACAAAAGGAATTTGCTGGGGACCCGGTAGTAGAATCATTGTAACAAGCAATAACAAGCAAGCATTAATTGCTGGAGGAGTTCATGCTATACATGAGGTCAAGGAATTGAACTTTGAAGAATCCCTTAAGTTGTTCAGCTTAAAGGCCTTCAAAAAGAGCCATCCGGAGAAGGGATATGAAGAACTTTCAAAAAAGGCTGTTGCTTATGCCAAGGGCCTTCCTCTGGCTTTAAAAGTCTTAGGTTTGTGTCTTTATTCTAGAGATAGAAAAACATGGAAAGATACAATGAGAAAACTTGAAATGTATCCCCATCCTCAAATTCAAGATGTGTTGAAAATGTGTCTCGATGGATTAGATGATATAGAAAGGGACATATTTCTTGACATTGCTTTCTTTTATAAAGGAGAAGATAAAGATCATGTCATAAGGCTACTTCATGCCAATAACCTTTTTCCTGATTGTGGAATAAAAGTACTTCTAGATAAAGCTCTTATATCTATCTCAAATGACAATATAATACAAATGCATGACCTGATTCAAGAAATGGGTTGGGAAATAGTTCGCCAAGAATGTAAGGAAAATCCTGGAAAACGTAGTCGATTGAAGGACTTTGAGGAAGTGTATGATGTGTTGAAGAACAAAAAGGGAACTGATGCCATTAAAGGCATAGCATTATATGCTTCTCTCTTTAAACATGTGCAGTTGAATGTTGACACTTTCAAAAATATGACTAATCTTAGAGTTGCCAAGTTCTACTCTCCCTGGCATGTGAGATCCTGTAATGTTAACCGTCCAACAAGTTTTGAGTCATTTGCTGATGAATTAAGGAGTCTAGAGTGGGATGGATACCCTTTCAAATCTTTAGCATTAAGTTTTTATCCTGAGAAACTTGTTGGGCATTCTTTGCCGAACAGCCATGTTGAGGAACTTTGGAAGCTAGTGGAGGATTATGCGCATTGTAAGAGAATAATCCTTGGCAGATCAAAACAGTCAATGCAGTTGCTTGATTTCTCAAAGGCACAGAAAATTCAATGGGATGATATTTGTGCTTGCGGAAGTTCTTGTAACGTCAGTCCACATATCTTATCTTTTTCCATGATTGCTGCTTTGAATCTAGCTTTCTCTAAAGATTCAAAGACTGTTCACAGTGAGCGTAATTTCAGAGCTCTTAGAGACTTTGACGTCGGTGTATGCTTTAATGTCAAGGTATTTTCATTGTCAGCAGGGGAAATATCAGAGTCGGATCTAGGAGCTTCAAAATTTGAAATGCTATACTCATCAATTGGAGGTCTCAGTGAGATTCTTCCTATAAATGAGTCGCGTTGCCTGAGATCTTTTGAAGAGCTTAGTTTTTCTTATTTCCGACAAATGAATCGAAGCTCAGATTATTTTTCACTAAGTTATTTGAATATGAATGAAAGTAGCATTGATAGCTCACCTGCTAGCATTAAAAATATCCCATTTCTCAAAACAATTTGCTTGAGGAATTGCAGGAGGCTTCGATCTATACCAGAACGACCACAATCAGTTATGCATTTAGATGCAACTACCTGCACATCACTGAAGACTGTATTAACTATAACTGCATCTAGACCACAGCAGAAAGGCATTTTGTCATATTGCTTTTCCTTTGTGAATTGTTTGAAATTGGATGACCATTCGCTTTTCAATATAATGCACAATGATTACCTCTCATTGAAGCGAGCAGTTCATAACAATTTTAAAGCAAGTGTTTTCTGTTATCTGAGTAGCAGAGTTCCAAAGTGGTTTGAATTTAAACAAGCAACAGAGGCTTCCATAACTATGCCGTTTTCACCAGCTATTAATGAATTATTGGGTTTTGTTTTTTGGGCTGTTCTTCGCCAGTTCAACTCAAATGAAATGTGTCCCGCTTACCTGAAATGTTTGTGCTACTTTGAAGATGGTGAAAAGCTAGAAGGATCAAGTACATGTGGTTATCCCATCACAGAATTGTACTCTGATCATGTTTTTCTGTGGCATGACCCGCTCTACAGTAAATCCCTTGTTGAAGGAGTTAAGAAAAGATTAGGAAAAAGTGAGGTTGTTCCAAAGGTCTCGTTTAGATTCTATGTTGTTACTTATGATGGTGACAATGGTGAGATGGCTGAACATGAATGCTTGGTCAAAAAATGCGGAGTCCGTCCAATATATGCTTCAGGACAACAAACGGAACTGGCACCGGAGTTAAAAATGAAGTCAAAGTGGGGGCTTGATAAGCCTGGTTCATTTAAGGGCCGAATTTATTCTAGGAAAAGGAAGAACAAGGACTTATTAACTACCCATTGA 3237 0.3812 MAAASSSSDDSQIKHDVFISFCGKDTRRGFLSHLVKELRREKIIVFVDENLNRGEGISSSLRRAIQESQISIVIFSENYASSSWCLDELAEIIKCVKVNKQIVLPVFYCIDPSHVRHQKGTYENAFADHELKFQGNGLKVQNWRSALKNAADLSGYVSSIYDNDSELIDEIVKYVLSRLEDVLLSLDHIYPNESEGLVGIDQQLYHIRSFLEMKTKEVQILGIWGMSGIGKTTIAQVAYDKFSSHYEGSCFIDNVREESQNHSLKYLKKKLISELQEENSTFVHIGFISRRKVLVVLDDVGTLEQLQYLVTKGICWGPGSRIIVTSNNKQALIAGGVHAIHEVKELNFEESLKLFSLKAFKKSHPEKGYEELSKKAVAYAKGLPLALKVLGLCLYSRDRKTWKDTMRKLEMYPHPQIQDVLKMCLDGLDDIERDIFLDIAFFYKGEDKDHVIRLLHANNLFPDCGIKVLLDKALISISNDNIIQMHDLIQEMGWEIVRQECKENPGKRSRLKDFEEVYDVLKNKKGTDAIKGIALYASLFKHVQLNVDTFKNMTNLRVAKFYSPWHVRSCNVNRPTSFESFADELRSLEWDGYPFKSLALSFYPEKLVGHSLPNSHVEELWKLVEDYAHCKRIILGRSKQSMQLLDFSKAQKIQWDDICACGSSCNVSPHILSFSMIAALNLAFSKDSKTVHSERNFRALRDFDVGVCFNVKVFSLSAGEISESDLGASKFEMLYSSIGGLSEILPINESRCLRSFEELSFSYFRQMNRSSDYFSLSYLNMNESSIDSSPASIKNIPFLKTICLRNCRRLRSIPERPQSVMHLDATTCTSLKTVLTITASRPQQKGILSYCFSFVNCLKLDDHSLFNIMHNDYLSLKRAVHNNFKASVFCYLSSRVPKWFEFKQATEASITMPFSPAINELLGFVFWAVLRQFNSNEMCPAYLKCLCYFEDGEKLEGSSTCGYPITELYSDHVFLWHDPLYSKSLVEGVKKRLGKSEVVPKVSFRFYVVTYDGDNGEMAEHECLVKKCGVRPIYASGQQTELAPELKMKSKWGLDKPGSFKGRIYSRKRKNKDLLTTH 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00213 1078 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Accr5g00213 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Accr5g00213 1078 Pfam NB-ARC domain 209 410 IPR002182 GO:0043531
Accr5g00213 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 830 IPR044974 GO:0006952
Accr5g00213 1078 SUPERFAMILY "Winged helix" DNA-binding domain 416 521 IPR036390 -
Accr5g00213 1078 Gene3D - 345 429 IPR042197 -
Accr5g00213 1078 SMART till_3 14 153 IPR000157 GO:0007165
Accr5g00213 1078 Pfam TIR domain 14 181 IPR000157 GO:0007165
Accr5g00213 1078 SUPERFAMILY L domain-like 484 830 - -
Accr5g00213 1078 Gene3D - 184 335 IPR027417 -
Accr5g00213 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 439 IPR027417 -
Accr5g00213 1078 Gene3D - 12 183 IPR035897 -
Accr5g00213 1078 PRINTS Disease resistance protein signature 794 810 - -
Accr5g00213 1078 PRINTS Disease resistance protein signature 220 235 - -
Accr5g00213 1078 PRINTS Disease resistance protein signature 287 301 - -
Accr5g00213 1078 PRINTS Disease resistance protein signature 380 394 - -
Accr5g00213 1078 Gene3D Ribonuclease Inhibitor 481 863 IPR032675 -
Accr5g00213 1078 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00213 Accr-Chr5 8105983 8109888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00213 6 819 WRKY Transcription Factor Family AT4G12020 29.093 4.80e-80 286