Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00211 ATGGCTCAAATCTTGACATCTATCTATTACTTTATTTTCTTCTGTTTGCTTCTTCAAAAGGTTTTGATTTTGTCGCTGTTTCTGGAACCCATTTTTCCAGTTTTGATTTCTTCCTCCACAACTACGGCGGCCGCTTCTTCCTCTGATGATTCTCAGATAAAACACGATGTGTTCATCAGTTTCAGTGGCAAGGACACAAGACGCGGTTTTCTGAGCCATCTAGTCAACGAACTACGCCGGGAGAAAATCTTAGTCTATGTAGATGAGAATCTGAACAGAGGAGAAGAAATATCATCCTCGCTCCTCAGAGCAATTCAAGAATCGCAAATTTCAATCGTCATATTCTCAGAAAACTATGCCTCTTCAAGGTGGTGCTTGGATGAGCTTGCAGAAATAATTAAGTGCATGAAAGTGAACAAACAAATTGTTTTGCCTGTTTTCTACTACATAGATCCCTCACATGTACGGAAGCAGGAAGGCGCTTATAAAACTGCTTTTGCTGATCATGAATCGAAGTTCCAAGGAGAGGGGTTAAAGCTTCAAAATTGGAGATCAGCCTTGAAGGATGCTGCTGACCTAGCTGGCTCTGTTGCAAACCATTACGATAATGACGCTGAGCTCATTGACGAAATCGTCAAAGATGTTTTGTTAAGATTGAATCCTGTCTATCCCAGTGAACCAAAAGGCCTTGTTGGAATTGATCGTCATATTGATCATATTAGATCATTTTTGGAAATGGAGTCAAAAGAAGTTCAAATCCTTGGAATTTGGGGCATGAGTGGCATAGGTAAAACAACCATTGCACAAGTTGCATATGACAAATTCTCTCCCCACTTTGAAGGCTCTTACTTTTTAGACAATGTGAGAGAAGAATTACAAAAGCATGGGCTGAAGTCTTTAAAACAGAAACTTATTTATGAACTGCAGGAGGACAAATCCACTTCTGTTCAAAAAAGGCTTCTTAGTCGAAGAAAAGTTTTTGTTGTGCTTGATGATGTTGATACTCCAGAACAACTACATAATCTGGTTACAGAGGGAATTCGTTTGGGGCCTGGTAGTAGAGTCATTGTAACAAGCAAAAACAAGCAAGAACTTGTTGCTGGAGGAGTTCATGACATACATGAGGTCAAGGAATTGGACTTTGAAGAATCCCTTAAGCTTTTCAGCTTAAATGCCTTCAAAAAGAGCCATCCTGAAAAGGGATAA 1206 0.3972 MAQILTSIYYFIFFCLLLQKVLILSLFLEPIFPVLISSSTTTAAASSSDDSQIKHDVFISFSGKDTRRGFLSHLVNELRREKILVYVDENLNRGEEISSSLLRAIQESQISIVIFSENYASSRWCLDELAEIIKCMKVNKQIVLPVFYYIDPSHVRKQEGAYKTAFADHESKFQGEGLKLQNWRSALKDAADLAGSVANHYDNDAELIDEIVKDVLLRLNPVYPSEPKGLVGIDRHIDHIRSFLEMESKEVQILGIWGMSGIGKTTIAQVAYDKFSPHFEGSYFLDNVREELQKHGLKSLKQKLIYELQEDKSTSVQKRLLSRRKVFVVLDDVDTPEQLHNLVTEGIRLGPGSRVIVTSKNKQELVAGGVHDIHEVKELDFEESLKLFSLNAFKKSHPEKG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00211 401 Gene3D - 52 218 IPR035897 -
Accr5g00211 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 399 IPR027417 -
Accr5g00211 401 Gene3D - 219 369 IPR027417 -
Accr5g00211 401 Pfam NB-ARC domain 235 398 IPR002182 GO:0043531
Accr5g00211 401 SMART till_3 54 193 IPR000157 GO:0007165
Accr5g00211 401 Pfam TIR domain 54 227 IPR000157 GO:0007165
Accr5g00211 401 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 195 IPR035897 -
Accr5g00211 401 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 55 398 IPR044974 GO:0006952
Accr5g00211 401 FunFam Disease resistance protein (TIR-NBS-LRR class) 51 220 - -
Accr5g00211 401 ProSiteProfiles TIR domain profile. 53 219 IPR000157 GO:0007165
Accr5g00211 401 PRINTS Disease resistance protein signature 320 334 - -
Accr5g00211 401 PRINTS Disease resistance protein signature 253 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00211 Accr-Chr5 7941627 7943261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00211 46 388 WRKY Transcription Factor Family AT4G12020 29.462 2.07e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00211 - - gsj:114380997 383.645