Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00205 ATGGAACAGTCGAAATTCGCTGCAGAATCTCCCTACAAGGAGATATCTGCCAGATGGGATCCAGATGAAGCATGCTTGCCCTTAATTGATGACGCACCTGTATTTTATCCGACTGCTGAGGAGTTTGGAGACACCCTTGGTTACATAGCAAAGATACGCCCCCTGGCTGAACCCTATGGCATATGTAGGATAGTCCCTCCACCTTGCTGGACTCCACTCTGCCCTCTTAAGGAGAAACATGTTTGGGAAAATGCTAAATTTTCCACCCGCATTCAGCAGATTGACTTACTTCAGAATAGAGAGCCCATGAGAAAGAAAAACAGGGGAAGGAAACGAAAACGTAGAAAGAACTCTAAAATGACAACCTGTAGGAGACTTGCCAAGCCTGATTCAGAAGTTAATGCTGCTTCTGAATCTGATGAAAAATTTGGATTCCAATCAGGACCAGACTTCACACTTAGAGACTTTCAACAATATGCTGCTTTTTTTAAAGAATGCTACTTCAGGACAAAGGATATCAAAGGCGATGGACAAGTTAGTGATAATAATTATCAGAAAAGGTTTGAGCCCTCTGTGAAGGAAATTGAAGGTGAATATTGGCGAATAATTGAGCAGCCAACTGATGAGGTCGAGGTGTATTATGGAGCTGACCTAGAAACTGGGTCACTTGGAAGTGGTTTTCCAAAGGCTGATTCCTTAACTAAGAGTGACTTGGATGAGTATGCACTATCTGGCTGGAATCTTAATAACTTCCCACGGCTTCCAGGTTCTGTGCTCTGTTTTGAAGGGAGTGATATTTCAGGAGTTCTAGTTCCTTGGCTCTATGTTGGGATGTGTTTTTCAACATTTTGCTGGCATGTTGAGGATCATCACCTTTATTCACTAAATTATTTGCACTGGGGCGATCCAAAAGTATGGTATGGAGTACCTGGCAGCCATGCTACAGCTTTGGAGGGTACGATGAGGAAGCATATGCCTGACTTGTTTGAGGAGCAACCTAATTTGCTCAATGAATTGGTCACTCAACTATCGCCTTCAATTCTTAAATCTGAGGGAGTGCCTATATTTCGCACTGTCCAGCATTCTGGGGAATTTGTGATGACCTTTCCAAGAGCATACCATGCTGGCTTCAATTGTGGTTTCAACTGTGCAGAGGCCGTGAATGTTGCCCCTGTAGATTGGTTACTGCATGGCCAGAATGCTGTTGAACTTTATAGTAAGCAGTGCCGTAAAACATCATTGTCACATGACAAGTTGTTGTTAGGATCAGCTCAGGAAGCTATAAAAGCCCTTTCAGAGGTCTTTTTTTATGGAAAAGAGACTCCAAAAATTTTGAAATGGAGAAGTGTCTGTGGGAAAGATGGTGTCCTTACAAATGCCATTAAGGCAAGGATAAAGATTGAGGAAGAGCGACTACAGGGTCTTCAAACTCCCCTGAAATTGGTGAAAATGGACATCAACTTTGATATGGATAAGGAAAGAGAATGCTTTGCTTGCTTCTATGATTTGCACCTTTCCGCTGTAGGTTGCCAATGCTCTGTTGATAAATACTCTTGTCTAAGACACTCAGAATCGTTTTGCTCATGTGCTTGTGAAGAAAGATTTGTTCTATTTCGTTATACCATAGAGGAGCTAAAAGAGTTGGTTAAAGCACTAGAAGGAGCGTTAGGAGCTATCAAGGTATGGACAAATAGGACCTCTGGAATGGTTTCTGTAGATGGTGGGGATGTTTGTTTAGATAAGCCATATGTGGGCAGAGGCATGTGCAAAACTAAGATCAATGAAGTGGAAAGTTCATCTTCTTGTGAAAGAATCAAGAAGTCAAAACTAAATGAAGATCCTCATAGTCATGTTTCTTCAGAATTAGTCCAGTTAGACTCTCAAGTGGAAAGTGCACCACATCACATTGTGGATAGCCATAATGACAATGTTGATGTCAAAAGCTTGGTTATGGATAATGAAATTAAGGGTGCATGGAATTGTTATATGGGTTTAAATCTTAATGTCATGTCTGATCAAAATGAAAGTTATATCCTTCGTATTGCTGATAGCAAAACAAACAAAGGTATTGGTTGTGTTGAAAAGGTCTGTTACCCAGACTCACAAAAGGAACAAGAAGATGTGGCACTTGATGATGAAGGAAATGTATCAGACATGTTTGCTCCAGTGAAGAAAGAATACCCATCGTGTTCTAGGGGAATTTCTAGTAAAGTTGATGCCGGCAAGAGGGATGATCTATTAATGCATCATGATTTGGGGGTACTAGCTATCAATGAATGTAAAATGGAGGCAATGAACAGTTTCAATAAAAACACATCTTTGACAAACCAAAGCTTTCTAATTCAGAAGTTTGTGACATCCATTGAGCTAGTAAGCCTAGGCTCCATTGTGCACGGAAAGCTGTGGTGTAGTAAGCACATGATATATCCAAAAGGATTCAAGAGTCGTATCAAGTTCTTTAGTATGCTTAATCCATCAAGAATCTGTAGCTATGTTTCTGAAGTTGTTGATGGTGGCTTAATTGGACCTCTTTTCAAGGTTAGCATGGAAGAACATCCAAATGAAAATTTCATGACCATGTCGGCAGAGAAGTGCTGGGAATCAGTTCTGCAGAAAGTAAATCGTGAGATCATCAAGCGCAAAAGCCAAGAGGAAATAACACTCTCTCCATTGGAACTTCTGCAAAGTATCAATGGTTTACAAATGTTCGGGTTCCTTTCTCCATCAATTATCCAGGGTATTGAAGCTCTGGATCCCAGTCATCAATGCATGGAATACTGGAATCACAAGGAATTAATCTCTTCTGTATCTTCCAGCACTACAAGTGATGATGTTAAGCTTGTGCGCGGCGGTTCAAGTAGCCTATCTGATGACGTTGAGACCAAAGTTTTTGGTATCGATATGACAAAGAAGGATGAAGATGATACCAAACCTATAGTGTCAAAACGGGACTCGTTCGAAGGGATGAAACTCATACTCGAAGGATTGTTGAAGAAAGCGAACCTGGATGAGTTAACCACAATGCAGAAGTTATTGGGTTCTGATGCACAAAGTTCTCAGTGGAGAGTGGAAATTGCGGCTCTGATAGAGGAGATCCAGAAAAGCATGTAG 3111 0.4108 MEQSKFAAESPYKEISARWDPDEACLPLIDDAPVFYPTAEEFGDTLGYIAKIRPLAEPYGICRIVPPPCWTPLCPLKEKHVWENAKFSTRIQQIDLLQNREPMRKKNRGRKRKRRKNSKMTTCRRLAKPDSEVNAASESDEKFGFQSGPDFTLRDFQQYAAFFKECYFRTKDIKGDGQVSDNNYQKRFEPSVKEIEGEYWRIIEQPTDEVEVYYGADLETGSLGSGFPKADSLTKSDLDEYALSGWNLNNFPRLPGSVLCFEGSDISGVLVPWLYVGMCFSTFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHATALEGTMRKHMPDLFEEQPNLLNELVTQLSPSILKSEGVPIFRTVQHSGEFVMTFPRAYHAGFNCGFNCAEAVNVAPVDWLLHGQNAVELYSKQCRKTSLSHDKLLLGSAQEAIKALSEVFFYGKETPKILKWRSVCGKDGVLTNAIKARIKIEEERLQGLQTPLKLVKMDINFDMDKERECFACFYDLHLSAVGCQCSVDKYSCLRHSESFCSCACEERFVLFRYTIEELKELVKALEGALGAIKVWTNRTSGMVSVDGGDVCLDKPYVGRGMCKTKINEVESSSSCERIKKSKLNEDPHSHVSSELVQLDSQVESAPHHIVDSHNDNVDVKSLVMDNEIKGAWNCYMGLNLNVMSDQNESYILRIADSKTNKGIGCVEKVCYPDSQKEQEDVALDDEGNVSDMFAPVKKEYPSCSRGISSKVDAGKRDDLLMHHDLGVLAINECKMEAMNSFNKNTSLTNQSFLIQKFVTSIELVSLGSIVHGKLWCSKHMIYPKGFKSRIKFFSMLNPSRICSYVSEVVDGGLIGPLFKVSMEEHPNENFMTMSAEKCWESVLQKVNREIIKRKSQEEITLSPLELLQSINGLQMFGFLSPSIIQGIEALDPSHQCMEYWNHKELISSVSSSTTSDDVKLVRGGSSSLSDDVETKVFGIDMTKKDEDDTKPIVSKRDSFEGMKLILEGLLKKANLDELTTMQKLLGSDAQSSQWRVEIAALIEEIQKSM 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00205 1036 MobiDBLite consensus disorder prediction 104 122 - -
Accr5g00205 1036 ProSiteProfiles FYR domain FYRN motif profile. 780 838 IPR003888 GO:0005634
Accr5g00205 1036 SMART JmjN_1 31 72 IPR003349 -
Accr5g00205 1036 Pfam JmjC domain, hydroxylase 273 389 IPR003347 -
Accr5g00205 1036 FunFam Putative lysine-specific demethylase JMJ16 786 924 - -
Accr5g00205 1036 ProSiteProfiles JmjN domain profile. 32 73 IPR003349 -
Accr5g00205 1036 Pfam F/Y-rich N-terminus 787 835 IPR003888 GO:0005634
Accr5g00205 1036 SMART fyrn_3 794 838 IPR003888 GO:0005634
Accr5g00205 1036 SMART cupin_9 240 406 IPR003347 -
Accr5g00205 1036 SMART fyrc_3 844 932 IPR003889 GO:0005634
Accr5g00205 1036 SUPERFAMILY Clavaminate synthase-like 237 427 - -
Accr5g00205 1036 Pfam F/Y rich C-terminus 842 928 IPR003889 GO:0005634
Accr5g00205 1036 Pfam C5HC2 zinc finger 496 548 IPR004198 -
Accr5g00205 1036 Pfam jmjN domain 33 66 IPR003349 -
Accr5g00205 1036 Gene3D - 784 924 - -
Accr5g00205 1036 ProSiteProfiles FYR domain FYRC motif profile. 840 930 IPR003889 GO:0005634
Accr5g00205 1036 Gene3D Cupin 17 390 - -
Accr5g00205 1036 PANTHER LYSINE-SPECIFIC DEMETHYLASE 29 916 - -
Accr5g00205 1036 MobiDBLite consensus disorder prediction 98 123 - -
Accr5g00205 1036 ProSiteProfiles JmjC domain profile. 240 406 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00205 Accr-Chr5 7877720 7885042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00205 786 968 JUMONJI Transcription Factor Family AT1G30810 47.541 8.86e-50 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr5g00205 JmjC 3e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00205 K11446 - gmx:100784581 1302.35