Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00163 ATGGGTGCTGCAGCTTCTTCGTCTTCGTCTTCCAAGAAATATGACGTGTTTATCAGTTTCAGAGGAGACGACACTCGCAAAACCTTCACCAGCCATCTCCATACATCCTTATGCCTCAAAGGTATTGAGACTTTCATTGATTATGAGCTCCCAAAAGGCGGTGGCATCTCCCAGTCACTCGAAGAAGCAATTCAGAATTCAAGCATATGTGTGGTTGTCTTCTCTGGAAGGTATGCAACTTCAAAATGGTGTTTGAATGAGCTCCTTGAGATCCTTCGCTGTAAACAGGAGCAGGGACAGCTTGTTGTTCCTATATTCTACCAAGTGGACCCATCTGATGTACGCCATCAAAGGGGAGCTTATGCGGAAGCATTTGCACAACATTTGAAGAAAAACCCAGACAATGTGGATGAGTGGAGAAAAGCCCTTTTTGAAACTGCAAATTTAGCTGGATGGCACTCTTGCAATTGCAGGGATGAAGCAGAACTCATTCAAAATATTGTCAGTGACATCATAAAAAAACTAAACCACGAGCCTCCAAGAAGTGTATTAGCAGATATTGTTGGAATTGAGGAGAATTTAGATCATATTGAATTGTTGTTAGAAGGATACTCAACAATTGGAATTTGGGGTATGAGCGGGATAGGTAAAACAACTATGGCTAGGGTTGTGTATACCAAATTATGCTCTCAATTTGACAGTTGCTGCTTTCTAGAAAATTTAAGAGAAAAGCAAGTAAAGCATGGGCTAGAATATATACGTGATCAACTTTTTAATGAGCTTTCAAAAGATACTTCTCTTGAAAGACTCAGTCGCAAAAAAGTTTTTATTGTACTGGATGATGTTAGCAACACAAGTCAGTTAGATTATTTGAAACGTGAAGCTCCCCCTTTGGGACCTGGTAGTAAAGTCATCATAACAAGTATAAATAAGCACGTACTTGATGGGAGAGTTGACAAAATACACAAAGCCATGGCATTGAGCTACCACGATTCACTTAAGCTTTTCAACCTCAAAGCCTTCCACGAAAATGGTTATAAAAGTGAATATAAAGAACTAGTTGAGAGAGCAATTGCTTATGCCCAAGGCGTTCCATTGGTATTAACCATTTTGGGTTCATTTCTTCATTCCAAAACTGTAAAGGAATGGGAAAGTGCATTGAGAAAAGTAGAAATGTCAAGCCATCAAGATATTCATCCTGTGTTAAAAGTGAGCTATGATGGGCTTGACGACGAGGAGAAAGAGATATTTCTAGATATTGCTTCTTTTTTTAAAGGTGAATCTAGAGAATCTGTTATAGCAGTGTTAGATGGTTGTGGTTTTCACACAAGCATTGGTTTGAGAAACCTTATGGATAAGGCTCTGATAAGTATTGATGATTATCATAACATACAAATGCATGATTTAATTCAATCAATGGCTTTTAAAATTGTCTGTCAACAGTATAAGAATCCTGAAGGACGTAGTCGACTTTGGAATCCTGACGAGATCTATGATGTGCTCAAAAGAAATTTGGGAACTAATGCAATAGAAGGCATATGTTTAGATTTGTCTCGAATTGGAGATTTACAATTAAGTGTTGATGCCTTTAGAAAGATGACTAAATTAAGGATTTTGAAATTCTGTTCACTCGGGCAAAAAAGACCGGCTGTTGTGAATCTTCCTTCAGGGCTTGAGTCATTTTCCAATTCATTAAGTTATCTTCGGTGGGACAATTTTCCTTCAAATACTCTACCATTGCCATTTTGTACTGAGAAGTTAGTTAAACTTTGCATGCCTAATAGCCACCTTGAAAAGTTATGGGATGGCATATAG 1815 0.3818 MGAAASSSSSSKKYDVFISFRGDDTRKTFTSHLHTSLCLKGIETFIDYELPKGGGISQSLEEAIQNSSICVVVFSGRYATSKWCLNELLEILRCKQEQGQLVVPIFYQVDPSDVRHQRGAYAEAFAQHLKKNPDNVDEWRKALFETANLAGWHSCNCRDEAELIQNIVSDIIKKLNHEPPRSVLADIVGIEENLDHIELLLEGYSTIGIWGMSGIGKTTMARVVYTKLCSQFDSCCFLENLREKQVKHGLEYIRDQLFNELSKDTSLERLSRKKVFIVLDDVSNTSQLDYLKREAPPLGPGSKVIITSINKHVLDGRVDKIHKAMALSYHDSLKLFNLKAFHENGYKSEYKELVERAIAYAQGVPLVLTILGSFLHSKTVKEWESALRKVEMSSHQDIHPVLKVSYDGLDDEEKEIFLDIASFFKGESRESVIAVLDGCGFHTSIGLRNLMDKALISIDDYHNIQMHDLIQSMAFKIVCQQYKNPEGRSRLWNPDEIYDVLKRNLGTNAIEGICLDLSRIGDLQLSVDAFRKMTKLRILKFCSLGQKRPAVVNLPSGLESFSNSLSYLRWDNFPSNTLPLPFCTEKLVKLCMPNSHLEKLWDGI 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00163 604 Gene3D - 326 410 IPR042197 -
Accr5g00163 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 420 IPR027417 -
Accr5g00163 604 PRINTS Disease resistance protein signature 269 283 - -
Accr5g00163 604 PRINTS Disease resistance protein signature 361 375 - -
Accr5g00163 604 PRINTS Disease resistance protein signature 206 221 - -
Accr5g00163 604 Gene3D - 7 178 IPR035897 -
Accr5g00163 604 Pfam TIR domain 13 181 IPR000157 GO:0007165
Accr5g00163 604 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 177 - -
Accr5g00163 604 SUPERFAMILY "Winged helix" DNA-binding domain 397 502 IPR036390 -
Accr5g00163 604 ProSiteProfiles TIR domain profile. 12 175 IPR000157 GO:0007165
Accr5g00163 604 Gene3D - 179 322 IPR027417 -
Accr5g00163 604 Pfam NB-ARC domain 206 406 IPR002182 GO:0043531
Accr5g00163 604 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 152 IPR035897 -
Accr5g00163 604 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 600 IPR044974 GO:0006952
Accr5g00163 604 SMART till_3 13 149 IPR000157 GO:0007165
Accr5g00163 604 Pfam Leucine Rich Repeat 586 604 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00163 Accr-Chr5 6649161 6651425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00163 9 603 WRKY Transcription Factor Family AT4G12020 32.630 3.31e-85 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00163 - - pcin:129287787 713.761