Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00147 ATGTTTGGCTTCATGAATTCTCTGAAACTCTTTCTTCTTCTTTTCCTTATAATCCCTTTGATTGCCAGAATCAAAGGACAAACTTACTCTTGTTCACCTACTACTTATGCCCAGAATAGCACATTCCAGACAAATGTTCATCTCTTACTTTCTTCCCTTTCCTCCAACGCCAGTCAAAGTGATGGTGGGTTTTACAACTCCACCATCTTCGGACAAGAAAACAACTCCAACGCCACCGTCTACGGCCTCTTCCAGTGTCTCGGCGATGCCACGGTCCAGACTTGTCAAAAATGTGTTTCTGACGGAATCGAAGATATCATTCAGAGATGCCCCAATAATACAGGAGCCATCGGTTGGTACGACAAGTGCTGGTTACGTTACTCCGGGGACGAGTATTTCTTCTCCAAAATGCAAGAACAGCCCCAGCTAATTTTGGTTATCACCCGCAATGCAACAAACACGGCTAGCTTTATGAAACTGTTGGGTGAAACCTTGAAAGTTGTTGCGAAAGAGGCGTCCCAAGGTGGAAGCAAGAAATTTGCGACGAAAAAAGAAAACTATAGTTCTTTTGAAACTCTGTATACAATGGCTCAGTGTACGCCGGATATATCTGAGACTAGTTGTCTCAACTGTCTAGGTAACAGTATAGGCAATTTGCCTAATTGCTGTAATGGAAATGTAGGCGGAGTAACCCTCAAGCCAAGTTGCTATTTAAGGTATGAAACGTATGCCTTTTACCAGGAACAGCCTCCCCCACCAGCTGCTCCGCCACCTAATCCTTCGCCGGAATCAACTTCCAAAGATAAAAGCAGGATCTCAGCTGGGATAATTATTGCCATAGCTATTCCTACAGTGATATTCATATTGCTTGTCTCGCTCTGCTTCTTGTGCTTAAAAAGGAGAGCAAGCAAACATACTCCAGTTCCTAAACAAACTGGTTCTGCATTAGTTGATATTTCAAGTGTAGAATCCCTACAATTTGATTTGAATACCATCAAATCAGCCACGAATGACTTCTCCGCTGACAATAAACTTGGTCAGGGAGGATTTGGTGAAGTATACAAGGGTATTCTACCTGGTGGACAAGAGTTAGCTGTAAAAAGGCTATCAAGCACTTCAAATCAAGGAGTAGGGGAATTTAAGAATGAAGTTCTTACAATGGCAAAACTTCAACATAGAAATCTTGTAAGGTTACTAGGATTTTGCTTGGATGAAGGAGAAAAGATACTCATATATGAATACCTGCCCAACAAAAGCTTGGATAATTTCTTGTTTGGAATGGAAAACCGAGCTAAGTTGAGTTGGTTAACACGTTACAAGATTATTGAGGGCATTGCAAGGGGAATGCTCTACCTTCATGAAGATTCAAGACTAAAAATTATACATCGAGATCTCAAAGCTAGTAATATATTGTTGGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGTATGGCTAAAATTTTTGGAGTTAATCAAACACAAGCAAACACAAGCAGAGTTGTCGGCACCTTTGGATATATGGCTCCAGAATATGTAATACATGGTCATATTTCAATCAAATCTGATATATATAGTTTTGGTGTCCTAATTTTGGAGATTATTTGTGGCAAAAAAAAATACATCTTTCTATGTATCAAGTTATGCTGA 1650 0.3994 MFGFMNSLKLFLLLFLIIPLIARIKGQTYSCSPTTYAQNSTFQTNVHLLLSSLSSNASQSDGGFYNSTIFGQENNSNATVYGLFQCLGDATVQTCQKCVSDGIEDIIQRCPNNTGAIGWYDKCWLRYSGDEYFFSKMQEQPQLILVITRNATNTASFMKLLGETLKVVAKEASQGGSKKFATKKENYSSFETLYTMAQCTPDISETSCLNCLGNSIGNLPNCCNGNVGGVTLKPSCYLRYETYAFYQEQPPPPAAPPPNPSPESTSKDKSRISAGIIIAIAIPTVIFILLVSLCFLCLKRRASKHTPVPKQTGSALVDISSVESLQFDLNTIKSATNDFSADNKLGQGGFGEVYKGILPGGQELAVKRLSSTSNQGVGEFKNEVLTMAKLQHRNLVRLLGFCLDEGEKILIYEYLPNKSLDNFLFGMENRAKLSWLTRYKIIEGIARGMLYLHEDSRLKIIHRDLKASNILLDEDLNPKISDFGMAKIFGVNQTQANTSRVVGTFGYMAPEYVIHGHISIKSDIYSFGVLILEIICGKKKYIFLCIKLC 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00147 549 Pfam Protein tyrosine and serine/threonine kinase 341 541 IPR001245 GO:0004672|GO:0006468
Accr5g00147 549 Pfam Salt stress response/antifungal 150 243 IPR002902 -
Accr5g00147 549 Pfam Salt stress response/antifungal 31 128 IPR002902 -
Accr5g00147 549 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Accr5g00147 549 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 541 - -
Accr5g00147 549 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Accr5g00147 549 FunFam Cysteine-rich receptor-like protein kinase 10 300 414 - -
Accr5g00147 549 SMART serkin_6 339 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00147 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Accr5g00147 549 ProSiteProfiles Gnk2-homologous domain profile. 24 132 IPR002902 -
Accr5g00147 549 SUPERFAMILY Protein kinase-like (PK-like) 319 541 IPR011009 -
Accr5g00147 549 MobiDBLite consensus disorder prediction 248 268 - -
Accr5g00147 549 MobiDBLite consensus disorder prediction 249 263 - -
Accr5g00147 549 Gene3D - 25 132 IPR038408 -
Accr5g00147 549 Gene3D - 143 245 IPR038408 -
Accr5g00147 549 FunFam Lectin-domain containing receptor kinase A4.3 415 544 - -
Accr5g00147 549 Gene3D Transferase(Phosphotransferase) domain 1 415 543 - -
Accr5g00147 549 FunFam Cysteine-rich receptor-like protein kinase 10 141 245 - -
Accr5g00147 549 Gene3D Phosphorylase Kinase; domain 1 301 414 - -
Accr5g00147 549 ProSiteProfiles Protein kinase domain profile. 339 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00147 Accr-Chr5 6176455 6179977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00147 4 543 Receptor kinase-like Gene Family AT4G05200 49.462 3.78e-177 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr5g00147 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00147 - - tcc:108662469 544.658