Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00083 ATGGTCTTCGCAGCATCCTTTATGCATGAAGATGGCCCTTTTTCTTTCTCCAAGAAGAGGCTGATAGTATCAGATTTTGGATATCAAGATCTACATCCACATGCATATGCAGGACCTTTCAGTGATGCACCATTGCCTTCACATCTCGATGTAGAAAGGGATACTGGTGATATTCCCTCTTCTTCCAGTCTTGATGATAGAGTTGATTCAGATTCTGAATTGGATATGAGCTGCAAGACTAATATTAAAAGCATTGATATTCCTGTATGCTTTACATCAGGAGATATTTCATTCCAGGATCAAAGCCATCCTGGCTATATGCAGCCTGCTTTTGTTAGTGGATGGATGTATGTCAATGAAAATGGGCAAATGTGTGGTCCCTATATCCAGGAGCAACTATATGAAGGATTAACTACTGGTTTCTTGCCAGCTGAGCTTCCTGTGTATCCTGTGATTAATGGCGCATTAATGAACCCTGTACCATTGAATTACTTCAAGCAGTTTCCTGATCATGTTTCCACTGGGTTCGTATATCTGAGCATGAGTAGCTCAGTCATAACCGTGCCTACAGGTTGCTCCACTTCATCTGGTAAGGATATGACATCATATAGACAAGGATCCTTTGAGCATGCTCCTCCTGTAGCTGTCAACCTTGATTCACTGACAGTTTTTCAGTCGCATGTCAACTACACCAGTAAGGAATTCTTAACATCGCACTCAAAGTTACATGAAGAATGCTGTTGGCTTTATGAGGATGAAAAAGGAAAGAAACATGGACCACATTCCATTTTGGAATTAATTTCCTGGCATCATTATGGACATCTCAGAGATTCGTCAGTGATTCATCATACTGAAAATAAGTGTAGCCCCTTTGTCCTTTTGTCTGCTGTAAATGCATGGAAAACAGGAACGTTTGAAAACATCTGTAGATCAGATTCCAAAAGTGACAGGGCTTGTAGTGATACCAGAAGCTTCATGTATGAAATATCTGAAGACATTTCTTCCCAGCTGCATTCAGGAGTCATGAAAACTGCCCGTAGGGTGGTGTTGGATGAGATTATCAGTAACACCATTGCAGAATTTGTTACTGAAAAGAAATCTCGGAGGCATAAGCATGACTTAGTTGATCAGCCTTCTGAGACTAGCTTGTTAGGCTGCAGAATGTCTGAGACTGCTGTGGAGATGAGAAAAGGTACTGTTCTTACAAGTGAGCCTTCATCTTCCCAAATGCTTGATGATCAGTCGTCTTGCAAAGTTTCCAAAATGTCTCCCACAAGCACTAAATCAGTTGGAAGCATTGAAAACTTTTGGTGGTCATATGCCGTTGTTCGAAAAGTACTTAATGATTATTGCATGCAAGTCATGTGGAATGCTGTGGTTTATGACTCTATGGCAGAGTACATACATAACTGGAGAAAGAGAAAACTATGGTCTATTTGTCCTAAGCCTGGATTATCTATTAGTGGATGTAAAGATTATGATGGAATTATCACATCAGCAGAAGCCTTGCTTCCCAGGCCAGGTTCCTCTGAACATGATGCTGTTCGGCATCCTCATTGTGGAGTGGTGGCAATGGAGGGGGACTATCTTAGTCAATCATTTTCTATGTCTTCTGCTGTCTTGAAAGATGGAAACATTTCAGAAAATGGAAGAGCATCATGTTCTGACAGTGATCATGGAGATTTGACATGTATTATTGAAAATATGGAGAATGAGCTTCACTCAATGTCAGAGGCATCTTTAACTGAATACATTAAAAGTTTAGTTGACAAGGAAGTGAAAAGATTATTTAATTGTCCCCAAGAAGACACTTTGAATAAGGATGCTGTCAGTGATGACGTTTTTTCAGAGATATCTTGTGACAAAACATCTGAAGAGGGGATTTTATCTGACAATAAGGTTGCTATGATAGAAGGCGGTGGTCTTCAAGATTCTATATCTGGAAACCATATGTCTACTTTATTCTCAAGAGCATTTCAGGAGTTGCATGCCAATGTAGGTGATGTGGATAATGAAAAGGAAATTGGTGACATCTTACCTCCTGGATGTGAAAAGAATTCAAAAACTATTCTCCCACAATACAATTATAAGTATAGACCTTCAAGATTAGTTGAAAATGTTCCTAAGATAACACAATATGTCACAACAGCCCTATGCCGACAGAGGCTGCATTCTGAGGTTCTTGAAGAGTGGAAATCTTCGTTTCTTGATGCTACATTCAATCAACTTTTTGCATCATTCTTTGCTGCAAAGAAAGTCAGCCAGCCTGATGGTTGCATGGAAGGGAGGGTACAAATTTCATCTGAGGAACATTTGAACGATCCAGCTCTGGGAAGAATGAAGAAAATACCCAAAATTTCTTCATCTGAAGATTCTCGGATGGTTGGGAAATATGCAAATCATCGCAAGAAGCTTCCACAGAAAGAGTTAGGTTCTTCTCAAAACATATCTGCGCCTGTCAAAAAACAAGTGGATAAGCAGAAGAAACCTGTGGATAAGCAGAAGAAACGTGTTTCTGGGGATTTGGATGACTCTGCCAAAGGTGCAATATCTCCTGATAAAAATGCACAGACTAAGCTGATAAAAGGGAAGAAGAATAAACAGGCTAATGGAAAGTTTCTTACTGTCAGTCCTAAAAGAAACTTGCTGAGTAAAAAGTCATCTATAAATGATGCAACTAGTAAAAAATTATTGAAGCATTCACAGGCAGGTCTAGATGATGTCAAGGATGATGAGAAAAGTAATGGAGAGAAGATTTCAACTGTTATAGAAAATAGTGTTGGCAAGAAAAAGGTAGTTGATAACAACGGTCATGATGGAGCCATTAATGGAAAATCCACTCGCCACTGCTCCAGGGAAACTCTCATCGCAACAAATAAAGTATCAAAACCAAAAAGGAAGCCTCTTGTGGATGATGTGCCATCCTCACGTCCCTCAAAGGCTTTGAAAATTGCTTATCATGGTTCAAAGGTTGGAGTTGGTGGACACATGTCAAAGACGAAGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGTTGGATGTTCCAGGACTTCTATTGATGGGTGGGAATGGCATAAATGGTCTCTAAATGCTAGTTCTTCTGATAGAGCACGTGTTAGGGGAACACTCTGTGGCCAAAAGAACTATATTCCATCTGATAGTAATCCAACTCATTGGTCAAATTGTAAGGGTCTTTCTGCACGGACAAATAGAGTGAAAATGCGTAACCTTCTTGCAGCTGCAGAAGGTGCTGATCTTCTGAAAGCCACTCAATTGAAGGCAAGGAAAAAACGTCTACGTTTTCAAAGAAGTAAAATTCATGACTGGGGTATAGTTGCCTTGGAGTCAATAGAGGCGGATGACTTTGTGGTTGAATATATTGGAGAACTAATCCGTCCTCGGATATCTGATATACGTGAACGTCAGTATGAAAAGATGGGAATTGGCAGCAGCTACTTGTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGCGAGGTGGGATTGCAAGATTTATAAATCACTCTTGTGAGCCTAATTGCTATACCAAGGTCATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCTAAGCGTCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAATTTCCCTTGGAGGAGAATAAGATTCCCTGCAACTGTGGCTCCAAAAAGTGTCGTGGATCACTGAATTAG 3720 0.3987 MVFAASFMHEDGPFSFSKKRLIVSDFGYQDLHPHAYAGPFSDAPLPSHLDVERDTGDIPSSSSLDDRVDSDSELDMSCKTNIKSIDIPVCFTSGDISFQDQSHPGYMQPAFVSGWMYVNENGQMCGPYIQEQLYEGLTTGFLPAELPVYPVINGALMNPVPLNYFKQFPDHVSTGFVYLSMSSSVITVPTGCSTSSGKDMTSYRQGSFEHAPPVAVNLDSLTVFQSHVNYTSKEFLTSHSKLHEECCWLYEDEKGKKHGPHSILELISWHHYGHLRDSSVIHHTENKCSPFVLLSAVNAWKTGTFENICRSDSKSDRACSDTRSFMYEISEDISSQLHSGVMKTARRVVLDEIISNTIAEFVTEKKSRRHKHDLVDQPSETSLLGCRMSETAVEMRKGTVLTSEPSSSQMLDDQSSCKVSKMSPTSTKSVGSIENFWWSYAVVRKVLNDYCMQVMWNAVVYDSMAEYIHNWRKRKLWSICPKPGLSISGCKDYDGIITSAEALLPRPGSSEHDAVRHPHCGVVAMEGDYLSQSFSMSSAVLKDGNISENGRASCSDSDHGDLTCIIENMENELHSMSEASLTEYIKSLVDKEVKRLFNCPQEDTLNKDAVSDDVFSEISCDKTSEEGILSDNKVAMIEGGGLQDSISGNHMSTLFSRAFQELHANVGDVDNEKEIGDILPPGCEKNSKTILPQYNYKYRPSRLVENVPKITQYVTTALCRQRLHSEVLEEWKSSFLDATFNQLFASFFAAKKVSQPDGCMEGRVQISSEEHLNDPALGRMKKIPKISSSEDSRMVGKYANHRKKLPQKELGSSQNISAPVKKQVDKQKKPVDKQKKRVSGDLDDSAKGAISPDKNAQTKLIKGKKNKQANGKFLTVSPKRNLLSKKSSINDATSKKLLKHSQAGLDDVKDDEKSNGEKISTVIENSVGKKKVVDNNGHDGAINGKSTRHCSRETLIATNKVSKPKRKPLVDDVPSSRPSKALKIAYHGSKVGVGGHMSKTKSAKSKPLNLCPRSVGCSRTSIDGWEWHKWSLNASSSDRARVRGTLCGQKNYIPSDSNPTHWSNCKGLSARTNRVKMRNLLAAAEGADLLKATQLKARKKRLRFQRSKIHDWGIVALESIEADDFVVEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEENKIPCNCGSKKCRGSLN 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00083 1239 MobiDBLite consensus disorder prediction 403 424 - -
Accr5g00083 1239 Gene3D SET domain 1011 1239 IPR046341 -
Accr5g00083 1239 MobiDBLite consensus disorder prediction 822 843 - -
Accr5g00083 1239 SUPERFAMILY SET domain 1095 1236 IPR046341 -
Accr5g00083 1239 ProSiteProfiles GYF domain profile. 245 295 IPR003169 GO:0005515
Accr5g00083 1239 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 782 1239 IPR044570 GO:0042800|GO:0051568
Accr5g00083 1239 MobiDBLite consensus disorder prediction 774 788 - -
Accr5g00083 1239 SMART PostSET_3 1223 1239 IPR003616 -
Accr5g00083 1239 ProSiteProfiles Post-SET domain profile. 1223 1239 IPR003616 -
Accr5g00083 1239 MobiDBLite consensus disorder prediction 770 857 - -
Accr5g00083 1239 Gene3D - 233 323 IPR035445 -
Accr5g00083 1239 Gene3D - 102 176 IPR035445 -
Accr5g00083 1239 SMART set_7 1100 1223 IPR001214 GO:0005515
Accr5g00083 1239 CDD SET_SETD1 1088 1235 IPR037841 GO:0042800|GO:0048188
Accr5g00083 1239 SUPERFAMILY GYF domain 242 297 IPR035445 -
Accr5g00083 1239 MobiDBLite consensus disorder prediction 47 70 - -
Accr5g00083 1239 ProSiteProfiles SET domain profile. 1100 1217 IPR001214 GO:0005515
Accr5g00083 1239 Pfam SET domain 1112 1216 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00083 Accr-Chr5 2462371 2472732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00083 1099 1239 C2H2 Transcription Factor Family AT2G23740 37.423 7.07e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr5g00083 SET 4.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00083 - - ccaj:109804065 1303.5