Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00079 ATGGCATTCCTCTTCAGAAAACTTCAATTTTCAGAGAAGCTTACACTTTGGTGGGTGCTGTTAGTTTGCTATTTAATCGTATTCCCATTTCATGTTTCCTCTTTCATTACTTCACCAAATAGTGAAGCAAACACTTTGCTAAAGTGGAAGGCTAGCCTTGACAACCAAAGCCAAACTCTATTATCAACATGGAGAGATAATAACAGTCATCCTTGCAATTGGGTTGGAATCGAATGCAATGAGTTCAACTCCGTTTTCAATATATCTCTTGAAGATCTTGGGTTAAGAGATTCTAACAATTGGACCTCATTTGCGGGCACCTTCGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTGACTGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTCAAAATAATTATGGGAAAACATCCAAGAGATCTCATAATGTCTTCTTCAAATGCACCAACAACAATTGCTCATGATTTGAATTTTAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCGAAGTTCAATGGCTGAGAAGGTTGTGTTGATTGCAATAATAGCTTTTAATTGCTTGAACGAAAATCCTCATAGTCGCCCATCCATGGAGCAAGTATGCAATGAGCTTGTCATGCCAAGATCACATGTTTTTGGTTCCATTCCATAG 669 0.3871 MAFLFRKLQFSEKLTLWWVLLVCYLIVFPFHVSSFITSPNSEANTLLKWKASLDNQSQTLLSTWRDNNSHPCNWVGIECNEFNSVFNISLEDLGLRDSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLAFKIIMGKHPRDLIMSSSNAPTTIAHDLNFKEVLDQRLPYPRSSMAEKVVLIAIIAFNCLNENPHSRPSMEQVCNELVMPRSHVFGSIP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00079 222 PANTHER LEUCINE RICH REPEAT KINASE 2 86 214 - -
Accr5g00079 222 Gene3D Transferase(Phosphotransferase) domain 1 36 217 - -
Accr5g00079 222 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Accr5g00079 222 Pfam Protein kinase domain 97 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00079 222 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00079 222 SUPERFAMILY Protein kinase-like (PK-like) 92 212 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00079 Accr-Chr5 2381906 2387803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00079 102 211 Receptor kinase-like Gene Family AT5G49660 38.261 4.99e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00079 Pkinase 1.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00079 - - pcin:129299596 218.009