Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00075 ATGGAGTTTCTCTTCATGAAACCTCAATTTTTGGAGAAGCTTACGCTTTGGTGCGTACTGTTAGTTGGCTATTTAATCTTGTTTCCATTTCTTGTTTCCTCTTTCATTACTTCACCAAATAGTGAAGCAAACACTCTGCTAAAGTGGAAGGCTAGCCTTGACAACCAAAGCCAAACTCTGTTATCAACATGGAGAGATAATAGCACTCATCCTTGCAATTGGGTTGGAATTGAATGCAATGAGTTCAACTCCGTTTTCGATATATCTCTTGGAAATCTTGGGTTAAGAGGTACGCTTGATGGTTTTAATTTCTCATCTTTAGTCAAATTAACATGGTTGGAGCTTGGTTACAACTACTTTTTTGGCCACATTCCTCCCGAAATTGGAAGGATGACTAACGTCTTGTACTTAGGACTTGGAAGTAATCAGTTTACTGGTTCTATCCCCCAAGAAATTGGAATGATGAAGAAACTTGAGGTACTGGACATGTCACAAAACAATCTCTCTGGATCTATTCCTTCTAGAATTGGAAACTTGACTGAGCTCTTTCAACTAAGTTTGAGTCAAAACAATCTTTCTGGATTGATTCCTTCTAGCATTGGAAACTTGACAAAGCTCTCCATATTAACTTTGAGTCAAAACAACCTTTCTGGATCTATTCCTTCTAGTATTGGAAACTTGATTGAGCTCTCCAAACTACGTGTGAATCACAACAAACTTAGTGGTAATCTTCCATCAGAAATTAATAACCTTAGAAAATTGGAAAACTTGCAACTTGCATACAATAATTTCAAAGGTCATTTGCCTCAAATCATTTGTCTTGGAGGATTACTTACTAACTTCACTGCACAGAACAATCAATTCACTGGTCCAATTCCTAGAAGTTTGAAGAATTGCTCTACCCTTTATAGAGTTAGACTTGAAAACAATCAATTGACCGACAATATAGCAGAAGCTTTTGGTATATATCCAAACTTGAACTACATTGCTTTAAGTAACAATGCATTTTATGGTCACTTGTCACCTACATGGGGGCAATGCCATAACCTTACAAGCCTCAAGATCTCTAATAATAACTTATCGGGGGACATACCACCGGAACTAAGCGAGGCAACAAAGTTACAGGGACTTGATTTATCATCAAATCACTTGATAGGAAATATTCCGAAGGAATTGAGTCACTTGTCATTATTGAGTGAACTTATGCTAAGCAACAATCAACTTTCAGGTAACATTCCTGTTGAGATTGAATTAATGAAGAACCTTAATAAATTGAATCTAGCTAACAATAATTTTAGTGGCTCAATTCCAGAACAATTTGGAGGGTTGATCAAGTTATGGAATTTGAGCTTAAGTGGAAATAAGTTCTTCAGCCTTCCATATAGTTTTGGCCAATTACAAAATCTTGAATACCTGGATCTTAGTGCAAATTCTTTTTCTGGTGGAATTCCAAAAATGCTTCAAGGGCTACAACGTTTAGAAATATTGAACCTCTCGCATAATAATTTCTCTGGTATGATTCCTTCATTTTTTGGTGATTTGAAAGGCTTGACTATAATTGACATATCACACAATAAATTAGAAGGCCCCCTTCCAAATAATTTTGCCTTTCGTAACGCTTCAATTGAGACATTGAAAGACAACAAAGGCTTATGTGGAAATGTATCTGGCTTGCCTATTTGCCCAACAAACAGTTACGATCCAAGGCATCATAAGAGAAACAAAGTGGTGATCTATGTTCTCTTCTTTGGCTTGGGATCTGTGTTGCTAGCAATAGTTTTTATGGGAATTTCATATATTGTTTTCCATCACAATGAAAGGAAAGCAAAAGGTCAAGAAAGAGAAGTGCAAACTCAAAATTTGTTTGCTATATGGAGTTATGATGGGAAGTTAGTATATGAAAACATTATTGAAGCCACAGAGGAGTTTGACGAAAAATATCTCATCGGGGTCGGAGGGTTTGGAAGCGTCTACAAAGCTGAATTGCCCACAGGTCAAGTTGTGGCTGTGAAAAAGCTTCATTTTCTACCAGATAGGGATCAATGTCATCAAAAAGCATTTATGAGTGAGATTCGGGCCTTGACAGAACCTAGGCATCACAATATCATCAAGCTATATGGGTTTTGCTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGCAGCTTGGATAAGATACTAAGTGATGATACACAAGCAATTGCATTGGGTTGGAATAAGAGAATCAAAGTTGTTGAAGGTGTGGCTAATGCTTTATACTATCTTCATCATGGACTCTCACCTCCGATAGTTCATCGTGACATATCAAGCAAAAATGTTATTTTAGATTCGGATTATGAGGCTCACATTTCTGACTTCGGGACGGCCAAGCTTTTATATGCAGATTCTAACAATTGGACCTCATTTGCTGGTACCTTTGGCTATTCTGCTCCAGAACTTGCGTTTACAACGAAAGTGACCGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCTTTTATTGATTCACCAACAATAGTTGCTCATGATTTGAATTTGAAGGAAGTGTTAGACCAAAGGCTAAATTATCCTCGAGGTTCTGTGGCTGAAGGTGATGATAATTGCAAGAATAGCTTTTACTTGCTTGAATGA 2688 0.3724 MEFLFMKPQFLEKLTLWCVLLVGYLILFPFLVSSFITSPNSEANTLLKWKASLDNQSQTLLSTWRDNSTHPCNWVGIECNEFNSVFDISLGNLGLRGTLDGFNFSSLVKLTWLELGYNYFFGHIPPEIGRMTNVLYLGLGSNQFTGSIPQEIGMMKKLEVLDMSQNNLSGSIPSRIGNLTELFQLSLSQNNLSGLIPSSIGNLTKLSILTLSQNNLSGSIPSSIGNLIELSKLRVNHNKLSGNLPSEINNLRKLENLQLAYNNFKGHLPQIICLGGLLTNFTAQNNQFTGPIPRSLKNCSTLYRVRLENNQLTDNIAEAFGIYPNLNYIALSNNAFYGHLSPTWGQCHNLTSLKISNNNLSGDIPPELSEATKLQGLDLSSNHLIGNIPKELSHLSLLSELMLSNNQLSGNIPVEIELMKNLNKLNLANNNFSGSIPEQFGGLIKLWNLSLSGNKFFSLPYSFGQLQNLEYLDLSANSFSGGIPKMLQGLQRLEILNLSHNNFSGMIPSFFGDLKGLTIIDISHNKLEGPLPNNFAFRNASIETLKDNKGLCGNVSGLPICPTNSYDPRHHKRNKVVIYVLFFGLGSVLLAIVFMGISYIVFHHNERKAKGQEREVQTQNLFAIWSYDGKLVYENIIEATEEFDEKYLIGVGGFGSVYKAELPTGQVVAVKKLHFLPDRDQCHQKAFMSEIRALTEPRHHNIIKLYGFCWHSKFSFLVYEFLEGGSLDKILSDDTQAIALGWNKRIKVVEGVANALYYLHHGLSPPIVHRDISSKNVILDSDYEAHISDFGTAKLLYADSNNWTSFAGTFGYSAPELAFTTKVTEKCDVYSFGVLALEIIMGKHPRDLIMSFIDSPTIVAHDLNLKEVLDQRLNYPRGSVAEGDDNCKNSFYLLE 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00075 895 FunFam Nuclear pore complex protein NUP107 39 193 - -
Accr5g00075 895 Gene3D Ribonuclease Inhibitor 39 193 IPR032675 -
Accr5g00075 895 PANTHER LEUCINE RICH REPEAT KINASE 2 200 880 - -
Accr5g00075 895 ProSiteProfiles Protein kinase domain profile. 643 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00075 895 ProSitePatterns Tyrosine protein kinases specific active-site signature. 767 779 IPR008266 GO:0004672|GO:0006468
Accr5g00075 895 SUPERFAMILY RNI-like 244 545 - -
Accr5g00075 895 Gene3D Transferase(Phosphotransferase) domain 1 722 892 - -
Accr5g00075 895 Pfam Protein kinase domain 645 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00075 895 SMART LRR_typ_2 179 202 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 419 442 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 490 513 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 395 418 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 203 227 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 251 275 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 443 465 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 107 131 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 466 489 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 155 178 IPR003591 -
Accr5g00075 895 SMART LRR_typ_2 514 539 IPR003591 -
Accr5g00075 895 Gene3D Ribonuclease Inhibitor 275 564 IPR032675 -
Accr5g00075 895 Gene3D Phosphorylase Kinase; domain 1 603 721 - -
Accr5g00075 895 SMART LRR_sd22_2 466 492 - -
Accr5g00075 895 SMART LRR_sd22_2 203 229 - -
Accr5g00075 895 SMART LRR_sd22_2 347 379 - -
Accr5g00075 895 SMART LRR_sd22_2 155 181 - -
Accr5g00075 895 SMART LRR_sd22_2 514 547 - -
Accr5g00075 895 SUPERFAMILY Protein kinase-like (PK-like) 625 849 IPR011009 -
Accr5g00075 895 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Accr5g00075 895 FunFam Leucine-rich repeat receptor protein kinase MSP1 606 721 - -
Accr5g00075 895 ProSitePatterns Protein kinases ATP-binding region signature. 649 672 IPR017441 GO:0005524
Accr5g00075 895 Pfam Leucine rich repeat 461 503 IPR001611 GO:0005515
Accr5g00075 895 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 251 565 - -
Accr5g00075 895 Gene3D Ribonuclease Inhibitor 194 274 IPR032675 -
Accr5g00075 895 SUPERFAMILY L domain-like 43 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00075 Accr-Chr5 2172061 2174897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00075 78 819 Receptor kinase-like Gene Family AT4G08850 44.890 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00075 Pkinase 4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00075 - - gmx:100795732 871.307