Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00074 ATGGCCATGGAGTTCTTATTCAGGAAACCTCAATTTTCGGAGAAGCTTACACTTTGGTGGGTACTGTTAGTTGGCTATCTAATCTTGTTCCCATCTCATGTTTCCTCTTTCATTACTTCACCAAATAATGAAGCAAAAACTTTGCTCAAGTGGAAGGCTAGCCTTGACAACCAAAGCCAAATTCTATTATCAACATGGAGAGATAATAGCAGTCATCCTTGCAATTGGATTGGAATTGAATGCAATGAGTTCAACTCTGTTTTCAATATATCTCTTGAAGATCTTGGATTAAGAGGTACGCTCGATAATTTTAATTTCTCATCTTTAGTCAAATTAACATGGCTAGAGCTTGGTTACAACTACTTTTTTGGTCACATTCCTCCTCAAATTGGAAGGATGACTAACCTCTTGTACTTAGGACTTGGAGGTAACCAGTTTATTGGTTCTATCCCCCCTGAAATTGGAATGATGAAGAAACTTGAGGTACTTGACATGTCAGAAAACAATCTCTCCAGTGGATTGATTCCTTCAAGCATTGGAAACTTGACAAAGCTTTCCAGACTAAGTTTGCATCTAAACAATCTTTCTGGATTGATTCCTTCTAGTATCGGATACTTGACAAAGCTCTCCATATTAGATTTGAATACAAACAACCTTTCTGGATCTATTCCTTCTAGTATTGGAAACATGACTGAGCTCTTCCTTCTAGAACTGTCTCAAAACAATCTTTGTGGACCCATTCCTTTAAGTATTGGAAAATTGACAAAGCTCTCTATATTAGATTTGGGAGTAAACAACCTTTCTGGATCCATTCCTTCTAGCATTGGAAACTTGATTGGGCTTTCCAAACTATTTGTGAATCACAACAAACTTAGTGGCAATCTTCCATCAGAAATTAATAACCTTACAAGATTGGAATCCTTGCAAATTGCATACAATAATTTCAAAGGTCATTTGCCTCAAAACATTTGTCTTGGAGGATTACTTTCTAACTTCACTGCACAAAACAATCAATTCACTGGTCCAATTCCTAGAAGTTTGAAGAATTGCTCTACACTTTATAGAGTTAGACTTGAAAACAATCAATTGACTGGTAATATAGCAGAAGCTTTTGGTGTATATCCAAACTTGAACTACATTGCTTTAAGTAACAATGCATTTTATGGTCACTTGTCACCTACATGGGGGCAATGCCATAACCTTACAAGCCTCAAGATCTCTAATAATAACTTATCGGGGGGCATACCACCGGAACTAAGTGAAGCAACAAAGTTACAAGGACTTGATTTATCATCCAATAACTTGATAGGAAATATTCCGAAGGAATTGAGTCACTTGTCATTATTGAGTGAACTTATGCTGAGCAACAATCAACTTTCAGGCAACATTCCTGCTGAAATAGGATCAATGAAGAACCTGGATAAGTTGAGTCTAGCTAACAATAATTTCAGTGGTTCAATTCCAGAACAATTTGGAGGGTTGATCACATTATGGAATTTGAGCTTAAGCGAAAATAAGTTCTTAAACCTTCCATATAGTTTTGGCCAATTACAAAATCTTGCATACCTGGATCTTAGTGCAAATTCATTTTCTGGTGGAATTCCAAAAATGCTTCAAGGGCTACAACGTTTGGAAATGTTGAACCTCTCGCATAATAATTTCTCTGGTATGATTCCTTCATTTTTTGGTGATTTGAAAGGCTTGACTATGATTGACATATCACACAATAAATTAGAAGGTCCCCTTCCAAATAATGTTGCCTTTCGTAATGCTTCAATTGAGACTTTGAAAGACAACAAAGGCTTATGTGGAAATGTACCTAGCTTGCCAATTTGCCCAACAAACAGTTATGATCCAAGTCATCATAAGAGAAACAAAGTGGTGATCTATGTTCTCTTCTTTGGTTTAGGATTTGTGTTGCTAGCAATAGTTCTGATGGGAATTTCATATATTGTTTGCCATCACAATGAAAGGAAAGCAAAAAGTCAAGAAAGAGAAGTGCAAACTCAAAATTTGTTTGCCATATGGAGTTATGATGGTAAGTTAGTATATGAAAATATTATTGAAGCCACAGAGGAGTTCAACGAAAAATATCTCATTGGGGTCGGAGGGTTTGGAAGCGTCTACAAAGCTGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTCATTTTCTACCAGATAAGGATCATTATCATCAAAAAGCATTTATAAGTGAGATTCGGGCCTTGACAGAAACTAGGCATCACAATATCATCAAGCTATATGGGTTTTACTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGCAGCTTGGATAAGATATTAAGTGATAAGACGCAAGCAATTGCATTGGGTTGGAATACGAGAATCAAAGTTGTTGAAGGTGTGGCTAATGCTTTATACTATCTTCATCACGGACTCTCACCTCCAATAGTTCATCGTGACATATCAAGTAAAAATGTTATTTTAGACTCGGATTATGAGGCTCACATCTCGGACTTCGGGACGGCCAAGCTTTTGTATGCAGATTCTAACAATTGGACCTCATTTGCTGGCACCTTTGGCTATGCTGCTCCAGAACTTGCGTATACAACAGAAGTGATCGAGAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCTTCTATTGATTCACCAACAATGGTTGCTTATGATTTTGATTTGAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGGTTCTGTGGCTGAGAAGGTGATGATAATTGCAAGAATAGCTTTTAGTTGCTTGAATAAAAATCCCGGTACTCGCCCATCCATGGAGCAAGTATGCAACGAGCTCTTGGTGCCTAGATCACATGTTTTTGGTTTCATTCCATAG 2928 0.374 MAMEFLFRKPQFSEKLTLWWVLLVGYLILFPSHVSSFITSPNNEAKTLLKWKASLDNQSQILLSTWRDNSSHPCNWIGIECNEFNSVFNISLEDLGLRGTLDNFNFSSLVKLTWLELGYNYFFGHIPPQIGRMTNLLYLGLGGNQFIGSIPPEIGMMKKLEVLDMSENNLSSGLIPSSIGNLTKLSRLSLHLNNLSGLIPSSIGYLTKLSILDLNTNNLSGSIPSSIGNMTELFLLELSQNNLCGPIPLSIGKLTKLSILDLGVNNLSGSIPSSIGNLIGLSKLFVNHNKLSGNLPSEINNLTRLESLQIAYNNFKGHLPQNICLGGLLSNFTAQNNQFTGPIPRSLKNCSTLYRVRLENNQLTGNIAEAFGVYPNLNYIALSNNAFYGHLSPTWGQCHNLTSLKISNNNLSGGIPPELSEATKLQGLDLSSNNLIGNIPKELSHLSLLSELMLSNNQLSGNIPAEIGSMKNLDKLSLANNNFSGSIPEQFGGLITLWNLSLSENKFLNLPYSFGQLQNLAYLDLSANSFSGGIPKMLQGLQRLEMLNLSHNNFSGMIPSFFGDLKGLTMIDISHNKLEGPLPNNVAFRNASIETLKDNKGLCGNVPSLPICPTNSYDPSHHKRNKVVIYVLFFGLGFVLLAIVLMGISYIVCHHNERKAKSQEREVQTQNLFAIWSYDGKLVYENIIEATEEFNEKYLIGVGGFGSVYKAELSTGQVVAVKKLHFLPDKDHYHQKAFISEIRALTETRHHNIIKLYGFYWHSKFSFLVYEFLEGGSLDKILSDKTQAIALGWNTRIKVVEGVANALYYLHHGLSPPIVHRDISSKNVILDSDYEAHISDFGTAKLLYADSNNWTSFAGTFGYAAPELAYTTEVIEKCDVYSFGVLALEIIMGKHPRDLIMSSIDSPTMVAYDFDLKEVLDQRLPYPQGSVAEKVMIIARIAFSCLNKNPGTRPSMEQVCNELLVPRSHVFGFIP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00074 975 SUPERFAMILY L domain-like 357 604 - -
Accr5g00074 975 Gene3D Ribonuclease Inhibitor 286 615 IPR032675 -
Accr5g00074 975 SUPERFAMILY L domain-like 61 388 - -
Accr5g00074 975 FunFam Nuclear pore complex protein NUP107 41 201 - -
Accr5g00074 975 Pfam Leucine Rich Repeat 159 182 IPR001611 GO:0005515
Accr5g00074 975 SMART LRR_typ_2 157 182 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 470 493 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 517 540 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 446 469 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 254 278 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 109 133 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 206 230 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 565 590 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 494 516 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 302 326 IPR003591 -
Accr5g00074 975 SMART LRR_typ_2 541 564 IPR003591 -
Accr5g00074 975 ProSitePatterns Tyrosine protein kinases specific active-site signature. 818 830 IPR008266 GO:0004672|GO:0006468
Accr5g00074 975 Gene3D Ribonuclease Inhibitor 202 280 IPR032675 -
Accr5g00074 975 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 323 616 - -
Accr5g00074 975 SUPERFAMILY Protein kinase-like (PK-like) 676 963 IPR011009 -
Accr5g00074 975 FunFam MDIS1-interacting receptor like kinase 2 isoform A 221 322 - -
Accr5g00074 975 Gene3D Ribonuclease Inhibitor 41 201 IPR032675 -
Accr5g00074 975 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Accr5g00074 975 Gene3D Phosphorylase Kinase; domain 1 653 772 - -
Accr5g00074 975 ProSiteProfiles Protein kinase domain profile. 694 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00074 975 Pfam Leucine rich repeat N-terminal domain 41 82 IPR013210 -
Accr5g00074 975 Pfam Leucine rich repeat 535 578 IPR001611 GO:0005515
Accr5g00074 975 Pfam Leucine rich repeat 472 529 IPR001611 GO:0005515
Accr5g00074 975 PANTHER LEUCINE RICH REPEAT KINASE 2 251 967 - -
Accr5g00074 975 Pfam Protein kinase domain 695 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00074 975 FunFam Leucine-rich repeat receptor protein kinase MSP1 656 772 - -
Accr5g00074 975 SMART LRR_sd22_2 565 598 - -
Accr5g00074 975 SMART LRR_sd22_2 206 232 - -
Accr5g00074 975 SMART LRR_sd22_2 157 184 - -
Accr5g00074 975 SMART LRR_sd22_2 517 543 - -
Accr5g00074 975 SMART LRR_sd22_2 254 280 - -
Accr5g00074 975 SMART LRR_sd22_2 398 430 - -
Accr5g00074 975 Gene3D Transferase(Phosphotransferase) domain 1 773 969 - -
Accr5g00074 975 FunFam MDIS1-interacting receptor like kinase 2 773 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00074 Accr-Chr5 2101416 2104520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00074 21 866 Receptor kinase-like Gene Family AT4G08850 43.319 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00074 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00074 - - gmx:100795732 951.814