Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00073 ATGGCATTCCTCTTGAGAAAACCTCAATTTTCAGAGAAGCTTACACTTTGGTGGGTACTGTTAGTTGGCTATTTAATCGTGTTCCCATCTCATGCTTCTTCTTTCATTACTTCACCAAATAGTGAAGCAAACACTTTGCTAAAGTGGAAGGCCAGCCTTGACAACCAAAGCCAAACTCTGCTATCAACATGGAGAGATAATAGCAGTCATCCTTGCAACTGGGTTGGAATTGAATGCAATGAGTTCAACTCCATTTTCAATATATCTCTTGGAGCTCTTGGGTTAAGAGGTACGCTTGATAGTCTCAATTTCTCATCTTTAGTCAAATTAACATTCCTGGAGCTTGGTTCCAACTACTTTTCTGGCCACATTCCTCCCCAAATTGGAAGGATGACTAACCTCTTGCACTTAGGACTTGAAGGTAATCAGTTTATTGGTTCTATCCCCCATGAAATTGGAATGATGAAGAAACTTGAGATACTTGTCATGTCACAAAACAATCTCTCTGGTAGCATCCCTAGTACTATCGGAAACATGTCTAGTTTAGAAGAACTTTATCTTTCTTCCAATCAAATGTCAGGGTCAATCCCACTTTCCATAGGGAACTTGGTCAATCTAAGCATCCTTTACCTTTTTGAAAACAACCTTTCTGGATTGATTCCTTCTAGCATTGGAAGCTTGACAAAGCTCTTCGCATTAGCTTTGTATATAAACAACCTTTCTGGATCTATTCCTTCAAGCATTGGAAACTGGACAAAGCTAGGCCATATATCTGTGTTTCAAAACAACCTTAGTGGCAATCTTCCTTCAGAAATGAATAACTTTAGCAAATTGGTAATCTTGCAACTTCCAGACAATAATTTCAAAGGTCATTTGCCTCAAAACAATTGTCTTGGAGGATTACTTACTCACTTCAGTGCACAAAACAATCAATTCACTGGTTTGATTCCTAGAAGTTTGAAGAATTGCTCTACCCTTTATAGAGTTAGACTTGAAAACAATCAATTAACAGGCAATATAGCAGAAGCTTTTGGTGTATATCCAAACTTGAACTACATTGATTTAAGTAACAAAGCATTTTATGGTCACTTGTCACCTACATGGGGGCAATGCCATAACCTTACAAGCCTCAAGATCTCTAATAATAACTTATCGGGGGGTATACCACCGGAACTAAGCAAGGCAACAAAGTTAGAAGGACTAGATTTTTCATCAAATCACTTGATAGGAAATATTCCCAAGGAATTGTGTCGCTTGTCATTGTTGAGTAAACTTGGGCTAAGTAACAATCAACTTTCAGGCAACATTCCTATTGACATAGGCTTATTAAAGAACCTTGAACAGTTGAGTGTAGCTAACAATAATTTAAGTGGCTCAATTCCAGAACAATTTGGAGGGTTGATCAAGTTATGGAATTTGAACTTAAGTGAAAATAAGTTCTTCATACTTCCATCTAGTTTCAGCCAATTACAACATCTCCAATTTCTAGATATGAGTGAAAATTCCTTTTCTAGTGAAATCCCAACAATGCTTGGACAACTTCAACAATTAGAATCATTGAACCTCTCGCATAATAATTTCTCTAGCATAATTCCTTCATTTTTTGATGATATGAAAAGCTTGACTATGATTGACATATCAGACAATAAATTAGAGGGTTCACTTCCAAATAGCTTGGCCTTTCATAATTCTTCATTTGAGACATTGAAAGACAACAAAGGCTTATGTGGAAATGTATCAGGCTTGCCAATTTGCCCACCAAAAATATCTGGTCCAAGGCGTCGTAAGAGAAATAAAGTGGTTATCTTTGCTCTATCCCTTGGTTTGGGATCTGTGTTGCTAGCAACAGTTTTGATAGGAATTTCATATATTATTTGCCATCGTAATGCACATAAAGAAAAAAGTCAAGAAAGAGAAGTGCAAACTCAAAATTTGTTTGATATATGGAGTTATGATGGGAAATTAACATATGAAAACATTATTGAAGCCACAGAGGAGTTTGACGAAAAATATCTCATTGGGGTTGGGGGGTTTGGAAGCGTCTACAAGGCTAAATTGTCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTCATTTTCTACCAGATAGGGATCAATGTCATCAAAAGGCATTTATGAGTGAGATTCGAGCCTTGACAGAAACTAGGCATCGCAATATCATCAAGCTATATGGGTTTTGTTGGCATTCAAACTTCTCCTTTTTGGTAATTGAATCCTTGGAAGGCGGCAGCTTGGATAAGATACTAAGTGATGAGACACAAGCAATTGCATTGGATTGGAATAAGAGAATCAAAGTTGTTGAAGGTGCGGTTAATGCTTTATACTATCTTCATCATGGATGCTCACCCCCTATAGTTCATCGTGACATATCAAGCAAAAATGTTATTTTAGACTTGGATTATGAGGCTCACATCTCTGACTTTGGGGCAGCCAAGCTTTTGTCTCCAAGTTCTAACAATTGGACCTCATTTGCTGGAACCTTTGGCTATGCTACTCCAGAACTTGCTTATACAATGGAAGTGACCGAGAAATGTGCCGTTTATAGCTTTGGAGTGTTGGTTTTGGAAATACTTATGGGAAAGCATCCAAGAGATCTCATAATGTCTTCTTTAGATGTACCAACAATAGTTGCTCATGATTTGAATTTTAAGGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGGTTCGGTGGCTAAGAAGGTGGTGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCTCATACTCGCCTATCCGTGGAGCAAGTATGCAATGAGCTTGCCATGCCAAAATCACATGTCTTTAGTTTCATTCCATAG 2847 0.3779 MAFLLRKPQFSEKLTLWWVLLVGYLIVFPSHASSFITSPNSEANTLLKWKASLDNQSQTLLSTWRDNSSHPCNWVGIECNEFNSIFNISLGALGLRGTLDSLNFSSLVKLTFLELGSNYFSGHIPPQIGRMTNLLHLGLEGNQFIGSIPHEIGMMKKLEILVMSQNNLSGSIPSTIGNMSSLEELYLSSNQMSGSIPLSIGNLVNLSILYLFENNLSGLIPSSIGSLTKLFALALYINNLSGSIPSSIGNWTKLGHISVFQNNLSGNLPSEMNNFSKLVILQLPDNNFKGHLPQNNCLGGLLTHFSAQNNQFTGLIPRSLKNCSTLYRVRLENNQLTGNIAEAFGVYPNLNYIDLSNKAFYGHLSPTWGQCHNLTSLKISNNNLSGGIPPELSKATKLEGLDFSSNHLIGNIPKELCRLSLLSKLGLSNNQLSGNIPIDIGLLKNLEQLSVANNNLSGSIPEQFGGLIKLWNLNLSENKFFILPSSFSQLQHLQFLDMSENSFSSEIPTMLGQLQQLESLNLSHNNFSSIIPSFFDDMKSLTMIDISDNKLEGSLPNSLAFHNSSFETLKDNKGLCGNVSGLPICPPKISGPRRRKRNKVVIFALSLGLGSVLLATVLIGISYIICHRNAHKEKSQEREVQTQNLFDIWSYDGKLTYENIIEATEEFDEKYLIGVGGFGSVYKAKLSTGQVVAVKKLHFLPDRDQCHQKAFMSEIRALTETRHRNIIKLYGFCWHSNFSFLVIESLEGGSLDKILSDETQAIALDWNKRIKVVEGAVNALYYLHHGCSPPIVHRDISSKNVILDLDYEAHISDFGAAKLLSPSSNNWTSFAGTFGYATPELAYTMEVTEKCAVYSFGVLVLEILMGKHPRDLIMSSLDVPTIVAHDLNFKEVLDQRLPYPQGSVAKKVVLIARIAFTCLNENPHTRLSVEQVCNELAMPKSHVFSFIP 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00073 948 PANTHER LEUCINE RICH REPEAT KINASE 2 224 941 - -
Accr5g00073 948 Gene3D Phosphorylase Kinase; domain 1 625 744 - -
Accr5g00073 948 SMART LRR_typ_2 514 537 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 490 513 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 467 489 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 443 466 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 538 563 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 203 226 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 107 131 IPR003591 -
Accr5g00073 948 SMART LRR_typ_2 155 179 IPR003591 -
Accr5g00073 948 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 296 588 - -
Accr5g00073 948 ProSitePatterns Protein kinases ATP-binding region signature. 673 696 IPR017441 GO:0005524
Accr5g00073 948 SUPERFAMILY RNI-like 257 569 - -
Accr5g00073 948 Gene3D Ribonuclease Inhibitor 387 481 IPR032675 -
Accr5g00073 948 FunFam Nuclear pore complex protein NUP107 39 195 - -
Accr5g00073 948 ProSiteProfiles Protein kinase domain profile. 667 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00073 948 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Accr5g00073 948 Gene3D Ribonuclease Inhibitor 482 582 IPR032675 -
Accr5g00073 948 Pfam Leucine rich repeat 445 502 IPR001611 GO:0005515
Accr5g00073 948 Pfam Leucine rich repeat 134 191 IPR001611 GO:0005515
Accr5g00073 948 Pfam Leucine rich repeat 516 560 IPR001611 GO:0005515
Accr5g00073 948 Pfam Protein kinase domain 669 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00073 948 Gene3D Ribonuclease Inhibitor 299 386 IPR032675 -
Accr5g00073 948 Gene3D Ribonuclease Inhibitor 196 298 IPR032675 -
Accr5g00073 948 Gene3D Ribonuclease Inhibitor 39 195 IPR032675 -
Accr5g00073 948 FunFam MDIS1-interacting receptor like kinase 2 isoform A 196 295 - -
Accr5g00073 948 SUPERFAMILY L domain-like 59 357 - -
Accr5g00073 948 ProSiteProfiles Leucine-rich repeat profile. 516 537 IPR001611 GO:0005515
Accr5g00073 948 ProSitePatterns Tyrosine protein kinases specific active-site signature. 791 803 IPR008266 GO:0004672|GO:0006468
Accr5g00073 948 Gene3D Transferase(Phosphotransferase) domain 1 746 943 - -
Accr5g00073 948 FunFam Leucine-rich repeat receptor protein kinase MSP1 630 745 - -
Accr5g00073 948 FunFam MDIS1-interacting receptor like kinase 2 746 942 - -
Accr5g00073 948 SUPERFAMILY Protein kinase-like (PK-like) 649 936 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00073 Accr-Chr5 1980424 1983410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00073 19 839 Receptor kinase-like Gene Family AT4G08850 40.517 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00073 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00073 - - gmx:100795732 949.503