Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00069 ATGGAGTTCCTCTTCAAGAAACCTCAATTTTCGGAGAAGCTTACACTTTGGTGGGTACTGTTAGTTGGCTATTTAATCTTATTCCCATCTCATGTTTCCTCTTTCATTACTTCACCAAATAGTGAAGCAAACACTTTGCTAAAGTGGAAGGCCAGCCTTGACAACCAAAGCCAAACTTTGTTATCAACATGGAAAGATAATGGCAGTCATCTTTGCAATTGGGTTGGAATTGAATGCAATGAGTCCAACTCTGTTTTTAATATATCTCTGGGAGATCTTGGGTTAAGAGGTACACTTGATAGTCTCAATTTCTCATCATTTCCCAATCTCCAATTCATAAATATGCGAAATAACTCATTTCATGGGATTATCCCTCCCCATATTGGTGAACTCTCCAAACTTCGTTTTTTAGATTTTTCTTTTAATGAGTTATCTGGTGGGATTCCAAAAACTATTGGCAACTTGTCCACACTCTCAGTTTTTTCTTTGAAACAAAATTATCTTTCTGGTGCAATTCCAGATGGGATTACACAATTGACTAGGCTTAATGCTCTATTCTTAAGTAACAATGATTTCAATGGCCATATTCCTGAAGCAATGGGAAATTTGACTAACCTCTTGTTTTTGGTACTTGGAGATAATCAATTTACTGGTGCTATCCCCAATGAAATTGGAATGATGAAGAAACTTGAGCAACTTGACATGTCAGAAAACAATCTCTCTAGTAGCATCCCTAGTACTATCGGAAACATGTCGAGGTTAGAACAACTTTATCTTTATAGCAATCAAATCTCAGGATCAATTCCACAGGAAATAGGGAAACTCTATTATTTAAAAGTATTGCAATTGCTAGCCAATAACATATTGGGGTCAATCCCACTATCCATAGGGAACTTGGTCAATCTAAGCGACCTCCGCCTTTTTCAAAACAACCTTTTTGGGTTGATTCCTTCTAGCATTGGAAACTTGACAAAGCTCTCCACACTAGCTTTGTATCAAAACAACCTTTCTGGATCTATTCCTTCTAGTATTGGAAACTTGACTGACCTCTCTGAACTAGATTTGTATCAAACCAATCTTTGTGGACCCATTCCTTCAAGTATTGGAAAATTGACAAAGCTCTCCATATTACATTTACACCTAAACAACCTTTCTGGATTTATTCCTTCAAGCATTGGAAACTTGACTGAGCTCTCTGTACTAAGTTTGTCTAAAAACAAACTTAGTGGACCCATTCCTTCAAGTATTGGAAAATTGTCAAAGCTCTCCATGTTATATATGGGAATAAACAACCTTTCTGGATTTATTCCTTCGAGCATTGGAAACTTGACCGAGCTCTCTGAACTACATTTGAATCAAAACAAACTTAGTGGCAATCTTCCATTAGAAATTAATAACCTTACAAAATTGGGATCCTTGCAAATTTCAGACAATAATTTCAAAGGTCATTTGCCTCAAAACATTTGTTTTGGAGGATTACTGTCTAACATCTCTGCAACAAACAATCAATTCACTGGTCCAATTCCTAGAAGTTTGAAGAATTGCTCTACCCTTTATAGAGTCAGGCTTGAAAACAATCAATTGACAGGCAATATGGCAGAAGCTTTTGGTGTGTATCCAAACTTGAACTACATTGATTTAAGTAACAATGCATTTTATGGTCACTTGTCACCTACATGGGGACAATGCCATAATCTTACTAGCCTCAAGATCTCTAATAATAACTTATCAGGGGGCATACCACCGGAACTAAGCATGGCAACAAAGCTACAGGGACTTGATTTATCATCAAATCAGTTGATAGGGAATATTCCAAAGGAATTGAGTCACTTAGCATTATTAAGTGAACTTATGTTGAGCAACAATCAACTTTCAGGCAACATTCCTGTTGAGATAGGATTAATGATGAACCTTGATAAGTTGAGTCTAGCTAACAATAATTTTAGTGGCTCAATTCCACAACAATTTGGAGGGTTGATCAAGTTATGGAATTTGAGCTTAAGTGGAAATAAGTTCTTCAGACTTCCATCTAGTTTCAGCCAATTACAACATCTCGAATTTCTAGATCTAAGTGCAAATTCATTTTCCGGTGGAATCCCAACAATGCTTGGACAATTTCAACAATTAGAAACATTGAACCTCTCGCATAATAATTTCTCTGGCATGATTCCTTCATTTTTTGATGATTTGAAAGGCTTGACTATGATTGACATATCGCACAATAAATTAGAAGGTCCACTTCCAAATAATTTTGCCTTTCGTAATGCTTCAATGGAGACATTGGAAGACAACAAAGGTTTATGTGGAAATGTTTCTGGCTTGCCAATTTGCCGCACAAGAAGTTACAGTCCATGGCATCATAAGAGAAACAAATGGGTGATCTATGCTATATCTCTTGGTTTAGGATTTGTGTTGCTAGCAATAGTTTTGATGGGAATTTCATATATTATTTACCATCACAATAAAAGGAAAGCAAAAAGTCAAGAAAGAGAAGTGCAAACTCAAAATTTGTTTGCCATATGGAGTTATGATGGGAAGTTATTATATGAAAACATTATTGAAGCCACAGAGGAGTTCGACGAAAAATATCTCATTGGGGTTGGAGGGTTTGGAAGCGTCTACAAAGCTGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGTTTCATTCAGTACCAGAGAGAGATCAGTGTCAACAAAAAGCGTTTATAAGTGAGATTCGGGCCTTGACAGAAACTAGGCATCATAATATCACCAAGCTATATGGGTTTTGTTGGCATTCAAAGTTCTCCTTTTTGGTTTATGAATTCTTGGAAGGGGGAAGCTTGGATAAGATACTAAGTGATGAGAAACATGCAATTGCATTGGATTGGAATAAGAGAATCAAAGTTGTTGAAGGTGTGGTTAATGCTTTATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACATATCAAGCAAAAATGTTATTTTAGACTCGAATTATGAGGCTCACATCTCTGACTTTGGGACGGCCAAGCATTTGTATCCAAATTCTAACAATTGGACCTCATTCGCTGGTACCTTTGGCTATGCTGCTCCAGAACTTGCTTATACAATGGAAGTAACCGAGAAATGTGACGTTTATAGTTTTGGAGTGTTAGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCTTCTACTAATGCACCAACAATAGTTGCTCATGATTTGAATTTTAAGGAAGTGTTAGACCAGAGGCTACCTTATCTTCTGCATGGTTCAGTGGCTGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCTCGTACTCGCCCATCCATGGAGCAAGTATGCAACGAACTTGTGGTGCCAAGATCACATGTTTCTGGTTCCATTCCATAG 3426 0.3713 MEFLFKKPQFSEKLTLWWVLLVGYLILFPSHVSSFITSPNSEANTLLKWKASLDNQSQTLLSTWKDNGSHLCNWVGIECNESNSVFNISLGDLGLRGTLDSLNFSSFPNLQFINMRNNSFHGIIPPHIGELSKLRFLDFSFNELSGGIPKTIGNLSTLSVFSLKQNYLSGAIPDGITQLTRLNALFLSNNDFNGHIPEAMGNLTNLLFLVLGDNQFTGAIPNEIGMMKKLEQLDMSENNLSSSIPSTIGNMSRLEQLYLYSNQISGSIPQEIGKLYYLKVLQLLANNILGSIPLSIGNLVNLSDLRLFQNNLFGLIPSSIGNLTKLSTLALYQNNLSGSIPSSIGNLTDLSELDLYQTNLCGPIPSSIGKLTKLSILHLHLNNLSGFIPSSIGNLTELSVLSLSKNKLSGPIPSSIGKLSKLSMLYMGINNLSGFIPSSIGNLTELSELHLNQNKLSGNLPLEINNLTKLGSLQISDNNFKGHLPQNICFGGLLSNISATNNQFTGPIPRSLKNCSTLYRVRLENNQLTGNMAEAFGVYPNLNYIDLSNNAFYGHLSPTWGQCHNLTSLKISNNNLSGGIPPELSMATKLQGLDLSSNQLIGNIPKELSHLALLSELMLSNNQLSGNIPVEIGLMMNLDKLSLANNNFSGSIPQQFGGLIKLWNLSLSGNKFFRLPSSFSQLQHLEFLDLSANSFSGGIPTMLGQFQQLETLNLSHNNFSGMIPSFFDDLKGLTMIDISHNKLEGPLPNNFAFRNASMETLEDNKGLCGNVSGLPICRTRSYSPWHHKRNKWVIYAISLGLGFVLLAIVLMGISYIIYHHNKRKAKSQEREVQTQNLFAIWSYDGKLLYENIIEATEEFDEKYLIGVGGFGSVYKAELSTGQVVAVKKFHSVPERDQCQQKAFISEIRALTETRHHNITKLYGFCWHSKFSFLVYEFLEGGSLDKILSDEKHAIALDWNKRIKVVEGVVNALYYLHHGCSPPIVHRDISSKNVILDSNYEAHISDFGTAKHLYPNSNNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSSTNAPTIVAHDLNFKEVLDQRLPYLLHGSVAEKVMLIARIAFTCLNENPRTRPSMEQVCNELVVPRSHVSGSIP 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00069 1141 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Accr5g00069 1141 FunFam MDIS1-interacting receptor like kinase 2 isoform A 294 390 - -
Accr5g00069 1141 SUPERFAMILY Protein kinase-like (PK-like) 841 1129 IPR011009 -
Accr5g00069 1141 ProSiteProfiles Protein kinase domain profile. 859 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00069 1141 FunFam Leucine-rich repeat receptor protein kinase MSP1 821 937 - -
Accr5g00069 1141 SUPERFAMILY L domain-like 229 486 - -
Accr5g00069 1141 Pfam Protein kinase domain 861 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00069 1141 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 468 781 - -
Accr5g00069 1141 ProSitePatterns Protein kinases ATP-binding region signature. 865 888 IPR017441 GO:0005524
Accr5g00069 1141 Pfam Leucine rich repeat 637 694 IPR001611 GO:0005515
Accr5g00069 1141 Pfam Leucine rich repeat 517 576 IPR001611 GO:0005515
Accr5g00069 1141 Pfam Leucine rich repeat 708 745 IPR001611 GO:0005515
Accr5g00069 1141 Pfam Leucine rich repeat 373 432 IPR001611 GO:0005515
Accr5g00069 1141 Gene3D Phosphorylase Kinase; domain 1 818 937 - -
Accr5g00069 1141 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 525 1130 - -
Accr5g00069 1141 SUPERFAMILY L domain-like 43 312 - -
Accr5g00069 1141 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
Accr5g00069 1141 Gene3D Ribonuclease Inhibitor 376 491 IPR032675 -
Accr5g00069 1141 SMART LRR_typ_2 131 155 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 227 250 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 179 203 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 395 419 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 659 682 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 706 729 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 611 635 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 371 394 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 251 275 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 467 491 IPR003591 -
Accr5g00069 1141 SMART LRR_typ_2 323 347 IPR003591 -
Accr5g00069 1141 ProSitePatterns Tyrosine protein kinases specific active-site signature. 983 995 IPR008266 GO:0004672|GO:0006468
Accr5g00069 1141 FunFam Nuclear pore complex protein NUP107 39 196 - -
Accr5g00069 1141 Gene3D Transferase(Phosphotransferase) domain 1 938 1136 - -
Accr5g00069 1141 SUPERFAMILY L domain-like 497 769 - -
Accr5g00069 1141 SMART LRR_sd22_2 323 349 - -
Accr5g00069 1141 SMART LRR_sd22_2 227 246 - -
Accr5g00069 1141 SMART LRR_sd22_2 587 606 - -
Accr5g00069 1141 SMART LRR_sd22_2 443 469 - -
Accr5g00069 1141 SMART LRR_sd22_2 730 763 - -
Accr5g00069 1141 SMART LRR_sd22_2 131 157 - -
Accr5g00069 1141 SMART LRR_sd22_2 395 421 - -
Accr5g00069 1141 SMART LRR_sd22_2 251 274 - -
Accr5g00069 1141 FunFam MDIS1-interacting receptor like kinase 2 isoform A 197 293 - -
Accr5g00069 1141 Gene3D Ribonuclease Inhibitor 293 375 IPR032675 -
Accr5g00069 1141 Gene3D Ribonuclease Inhibitor 492 783 IPR032675 -
Accr5g00069 1141 Gene3D Ribonuclease Inhibitor 39 196 IPR032675 -
Accr5g00069 1141 FunFam MDIS1-interacting receptor like kinase 2 938 1135 - -
Accr5g00069 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 396 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00069 Accr-Chr5 1810045 1813618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00069 19 654 Receptor kinase-like Gene Family AT4G08850 36.620 2.14e-115 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00069 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00069 - - gmx:100808316 1116.29