Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00068 ATGGAACCAACACAATCCCTGATCCCTCCTTTACTCTCTCTCTTTCTCTTCTTCAATATCTATCCCTCGGCACAGTATCCGTCACCTACCACCGTCTCCGGCGACCGCCATCGGGAAGCATTACGCAGATTCGAAGCTCTCAAAGCTTCTCGTGTCAGACTCAGTGATTCACCACCGTCTCCTTCTCCTTCTCCGTTTCCGTCGCCACCACCGCCGGGTTCAAATGGTCCACGGGTATACTTACCGACGTCGTACGGGGCGGATCCGACGGGGAAGCTGGACAGTACGGACGCCCTTCTTGCAGCGATAACAGATGCGACGAATGGTCACAGTGAAGGGTCTTTGATCGCCGGCATTGCTAATCTTGGAGGCGCACAGCTTTATCTTCAGGGTGGCAACTACTTGATCAGCCGACCGCTCCGATTTCCGGCCGCCGGCGTCGGAAACTTTGTGATCCATGGTGGGACCATACGAGCCTCAGATAGCTTTCCACCAGATGGCTACCTCATTGATTTATCAACAACCAATGGAAACGACAAAACTACCCCCTCTTCATCCTACAATTACGAATTCATCACCTTCAGGGACCTTCTCTTAGACTCCAACTACCATGGAGGAGGCATCTCAGTCATCAACTCTCTCCGAACCGGCATCGACAACTGCTACATCTCTCACTTCACCACTAACGGAATCCTCGTCCAAGCCGGTCACGAAACCTACGTCAGAAACTCCTTCATCGGCCAACGCATCACCGCCGGTGGCGACAAAGGAGAAAGGAACTTCACTGGTACCGGGATAAACCTCCAAGGAAACGACAACTCCATCACCGACGTCGTCGTCTTCTCCGCCGCCATCGGAATAATGGTCTCCGGTCAGGCCAACATAATCTCCGGTGTACATTGCTATAACAAAGCCACCGGCTTCGGAGGCACCGGCATTTATCTCAAACTCGCCGGGCTGACACAAACTAGGGTTTTGAATTCTTACATGGATTACACTAGTATTGTCGCAGAAGACCCAGTTCACCTTCATATTTCTGGTACTTTCTTCCTCGGAGATGCCAATGTTGTCCTCAAATCGGTCAACGGGGTGGTCAACGGAGTAAACATAGTAGACAATATATTTTCTGGGAATAACAATGGGGTTGAAATTGTTCAGCTGGATCAATCAAATGGTAATAATTTTAGGAAAGTTGATCAGGTTGTGGTGGATCGGAACGCTGTGGTGGGGATGAAGTTGAAGAGTACGGTGGCGAAGAAGATTGTGGAAGCGAATGGGACCTCATTAATGGCGGATTTTAATGATGTTTTGCTTTTTCCTAACCTTATAAAACATGTGCAGTATTCATTGAGCTTCGAAGGCGACACTTTTCCAAGTTATGTTCTAAGGAATGTGTCGGATAATCGTGTCGTGATTCAAACAAGTGAAGCAGTGCCTGCAAATTTATATGTTACCGTGGATCAAAGTATATATAATTGA 1479 0.4861 MEPTQSLIPPLLSLFLFFNIYPSAQYPSPTTVSGDRHREALRRFEALKASRVRLSDSPPSPSPSPFPSPPPPGSNGPRVYLPTSYGADPTGKLDSTDALLAAITDATNGHSEGSLIAGIANLGGAQLYLQGGNYLISRPLRFPAAGVGNFVIHGGTIRASDSFPPDGYLIDLSTTNGNDKTTPSSSYNYEFITFRDLLLDSNYHGGGISVINSLRTGIDNCYISHFTTNGILVQAGHETYVRNSFIGQRITAGGDKGERNFTGTGINLQGNDNSITDVVVFSAAIGIMVSGQANIISGVHCYNKATGFGGTGIYLKLAGLTQTRVLNSYMDYTSIVAEDPVHLHISGTFFLGDANVVLKSVNGVVNGVNIVDNIFSGNNNGVEIVQLDQSNGNNFRKVDQVVVDRNAVVGMKLKSTVAKKIVEANGTSLMADFNDVLLFPNLIKHVQYSLSFEGDTFPSYVLRNVSDNRVVIQTSEAVPANLYVTVDQSIYN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00068 492 SMART pbh1 213 235 IPR006626 -
Accr5g00068 492 SMART pbh1 270 291 IPR006626 -
Accr5g00068 492 SMART pbh1 147 172 IPR006626 -
Accr5g00068 492 SMART pbh1 365 386 IPR006626 -
Accr5g00068 492 PANTHER POLYGALACTURONASE QRT3 37 489 IPR039279 GO:0004650
Accr5g00068 492 MobiDBLite consensus disorder prediction 51 87 - -
Accr5g00068 492 Gene3D - 82 489 IPR012334 -
Accr5g00068 492 FunFam Polygalacturonase QRT3 82 483 - -
Accr5g00068 492 Pfam Pectate lyase superfamily protein 83 307 IPR024535 -
Accr5g00068 492 MobiDBLite consensus disorder prediction 58 77 - -
Accr5g00068 492 SUPERFAMILY Pectin lyase-like 78 413 IPR011050 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00068 - - gmx:100804107 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00068 5 1627897 1631239 Accr5g00068 5 1627897 1631239 ECH