Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00048 ATGATTACGTTGCCATATTCTCCATCTCCTGCCTCTTCTTGCTTACGTACCAAAACAAGGTTCCCCAAACCCAAATCCAGTACTAGTTCTTTCCTCTCTCAAATTCAAGTCAATGATTCTCCAACAAAAACATTCAAATTTGTCCCTGTCTCAACAAATGATCCCTCAACCCCAGACGATGGAAAGTTCAAGCGAAGAGAGGCAATAGGGCTTGCCTTTGGGTTTGGCCTTTGCAATGTTGTGTTTCATTCGCTGCCGGAAGCCACGTCAGCAGCTGAAGCCAAGGCTCCATGCGAGCTAACAGTGGCTGCTTCGGGCATCGCTTTCTGTGATAAAGTTGTGGGAAATGGTCCTCAAGCTGTTCAGGGTCAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGATAGCAGCTATAATCGCGGCAAGCCTCTTACATTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGGATGAGGGGATATTAGGAGGGGAAGGAATACCTCCCATGCTTGCAGGAGGCAAACGGACATTGAAAATTCCTCCACAACTTGCGTACGGCTCAAGAGGTGCTGGTTGTAGGGGAGGTTCATGTGTCATCCCTCCTGATTCGGTCCTATTATTTGATGTGGAGTTCATTAGCAAGGCTTGA 669 0.4709 MITLPYSPSPASSCLRTKTRFPKPKSSTSSFLSQIQVNDSPTKTFKFVPVSTNDPSTPDDGKFKRREAIGLAFGFGLCNVVFHSLPEATSAAEAKAPCELTVAASGIAFCDKVVGNGPQAVQGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGIPPMLAGGKRTLKIPPQLAYGSRGAGCRGGSCVIPPDSVLLFDVEFISKA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00048 222 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 33 220 IPR044183 GO:0009507
Accr5g00048 222 MobiDBLite consensus disorder prediction 1 33 - -
Accr5g00048 222 FunFam Peptidylprolyl isomerase 95 221 - -
Accr5g00048 222 SUPERFAMILY FKBP-like 100 220 - -
Accr5g00048 222 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 118 219 IPR001179 GO:0003755
Accr5g00048 222 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 123 222 IPR001179 GO:0003755
Accr5g00048 222 Gene3D - 95 222 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00048 Accr-Chr5 1267048 1269491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00048 87 220 Calmodulin-binding Proteins AT5G48570 38.849 4.25e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00048 K01802 - cit:102612618 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00048 5 1267048 1269491 Accr5g00048 5 1267048 1269491 ECH