Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00046 ATGGCTTTACCAGTGAGGATTGTTCTGTTACTCCTCTGCTTCTCTTCTGTTTTACTTCTCCTCTGTCATGGCAAGTCTGATTCAGAGGGTGATGATTCATCTTCCACATTGAGGTTGCTTTTAGAGGTGAAGAAGTCGTTCATGGAGGACCCAGAAAATGTTTTGGCTGATTGGTCTGAGAACAACACGGATTACTGTAGCTGGAGAGGGATTACTTGTGGATTGAACTCTATGTTAGTGGGACTTAACCTTTCTGACTCGTCACTCACTGGGTCAATCTCTCCCTCACTTGGTCTCTTGCGTAACCTGCTCCAACTTGATCTTTCATCTAACCGCCTTACTGGTCCCCTCCCACCTGCTCTCTCGAACATCACTTCTTTGGAGTTTCTGCTTCTCTTCTCTAACCAACTCACTGGTCACATCCCTACTGGGCTCGGCTCGCTCGCAAGTCTCCGAGTCTTGCGAATCGGAGACAACCCGTTGACAGGTCCCATTCCTTCGTCCTTTGGGAATTTAGCTAGTCTCGTGACTCTTGGTTTGGCCTCTAGTAGTCTCACCGGGTCTATCCCATGGCAACTCGGTCGACTCAACCAGCTTGAGAATCTTGTTCTACAAGAGAATGAACTCACGGGTCCTATTCCACCCGAGTTAGGAAACTGTTCGAACCTCACTGTTTTCACTGCTGCAAACAACAGACTCAATGGGACTCTTCCGAGTGAACTTGGTGGCCTTGAGAATCTTAATCTTTTGAACCTTGCAAACAACAGTATAACAGGGGAGATTCCGAGTGAACTCAGGAATCTGAGTCAGCTCGGATATTTGAACCTCATGGGAAACCAACTCGAGGGTCGTATTCCATTGTCTTTAGCTCAACTGGATAATCTTAAAAATCTGGACTTGTCGTTCAACAAGCTTGTTGGTGGGATTCCTCAAGAACTTGGAAACATGGGCCAGCTACAGTACATGGTTCTGTCTGGGAATCATCTCTCAGGGATCATCCCGAGAGGTTTATGTTCCAACTTGACGAGTTTGGAGCATTTGATGTTGTCGGATACTGCACTTTCAGGTGAGATTCCCAGTGAGTTAAGCCAGTGTCAATCCATCAAACAACTTGATTTGTCAAACAATTCCTTAAATGGATCAATACCCATTGAACTTTATGGAATGACTGGGTTAACTGATTTGTTGCTCAATAACAACAGCTTGGTTGGCTCAATCTCTCCTTTCATAGGAAATCTCAGTAACCTGGAGACACTTGCATTGTTCCACAATAATTTACAGGGTTCTCTCCCAAGAGAGATTGGGATGCTGGCAAAGTTGGAAATACTGTTTCTATATGATAATCAATTTTCAGGGGAGATACCTTTGGAGATTGGTGATTGTTCTGGCTTGCAGATGATTGATTTCTTCGGAAACAAGTTTGGTGGGGAAATTCCCTTCACTATTGGAAGGCTTAAGGATTTGAATTTCCTTCACCTCAGACAGAACCAGCTTGTTGGAGAGATTCCAGCCACTTTGGGTAACTGTCATAACCTAACTATTCTTGATTTAGCAGACAATTATCTCTCAGGTGGGATTCCTTCAACGTTTGGATTGCTGAAAGATTTGGAGCAACTCATGCTTTATAACAATTCACTTGAAGGCAATCTCCCTCACCAACTGATAAATCTGAAGAATCTGACAAGGGTGAATCTTTCAAAGAACAGATTGAATGGTAGTTTATCTGCATTATGTAGCTCTCGGAATTTTCTGTCTTTTGACGTCACTAACAATGCATTTGATGGTGAAATCCCACCCCAGCTTGGAAATTCACATTCTCTTGAGAGGCTGAGATTAGGAAAGAACAACCTTTCTGGTGAAATACCAAGGACATTGGGGAAAATTGAAGAGCTTTCATTGTTAGACCTGTCTGAAAATTCTCTCACTGGATCAATCCCAGCAGAGATTTCCTTGTGCAAGAAGCTAGCTCATATAGATCTGAACAATAATATGCTATCTGGGCCAATTCCATCCTGGCTTGGAAGCTTGCCTCAGTTGGGAGAGCTTAAGCTATCTTTCAATCGCTTTTCTGGGAATCTTCCATCAGAGCTATTCACATGTTCTAAATTGCTAGTTCTCTCCCTAAACAGCAATTCTCTTAATGGAACTATTCCTGATGATATAGGCAATCTTACATCCCTTAATAGCCTCAACGTTGAGCAAAATAACTTCTCTGGACCAATCCCTCCAGCGATTGGTAAGTTAAGCAAGCTTTATGAGTTGAGAATGGCCAGGAACAGCTTTAATGGTGAGATTCCAAGTGAGCTTGGGAGGCAGCAGAATCTTCAAAGCATGTTAGACCTCAGTTACAACAACCTCTCTGGCGAAATCCCACCTTTTCTCGGGACTCTGACAAAGTTGGAAGAGCTTGATCTTTCTCACAATCAACTCACAGGACAAGTCCCTCTTCAAGTTGCTGAAATGAGCAGCTTGGGGAAGCTTGATCTTTCTTACAATAAACTTGAAGGTGTGTTAGATGAGAAATTTTCCCATTGGCCACCCAAGGCATTTGAAGGTAATCCACGCCTTTGTGGAAGCCCTCTTAAACACTGTGATACCGACGGTTCGAGAAATCACCTGTTAGGCCTGAGTATAACATCATTAGTGATAGTCTCAGCTCTTTCAACATTAGCAGCAGTTGCACTAGCAATACTTGCAGTAAGAATGTTCATGAAAAACAAGCAAGAATTTCTCAGAAAAGGCAGCCAAGTGAACTATGTTTACTCCTCATCCTCCTCATCATCACAGGCACAACGAAGGCCACTCTTCCGGTACAATAGAGCAGTGAAACAAGACATAAGGTGGGAGGACATCATGGAGGCCACAGAAAATCTAAGTGACGAGTTCATAATCGGTACGGGAGGGTCCGGGACAATCTATAGAGCAGAATTTCCATCAGGAGATACGGTGGCAGTAAAGAAAATCTCAGCTAAAGATGACTTTATGCAGAACAAGAGCTTTGTGAGAGAAGTGAAGACTCTTGGGAGGATTAGGCATAGACATCTAGTGAAGTTGAGGGGTTATTGCAGCAACAAGAACAAAGGAGAAGGATGGAATCTGCTTATATATGAGTTCATGGAGAATGGGAGTGTGTGGGATTGGTTACATGGGAAACCAGAGAAGACCAGAAGAATCCTTGATTGGGAAGCAAGGTTCAAGATTGCAGTGGGATTAGCCAGAGGAGTGGAGTATTTGCATCATGACTGCGTCCCAAAGATAATCCACAGAGACATCAAATCCAGCAATGTGTTGTTAGATTCCAAAATGGACGCTCACTTGGGAGACTTTGGATTGGCAAAAGAACTCAACATTGACAACTCCAACACTGAGTCCAACACTTGGTTTGCTGGGTCCTATGGCTACATTGCTCCAGAGTGTGCATATTCAGTGAAGGCAACAGAGAAGAGTGACGTGTACAGTATGGGGATAGTGTTGATGGAGCTGGTGAGTGGGAAGATGCCAACAGACGAAGCATTTGGAGGAGAGATGGATATGGTGAGATGGGTTGAGATGAACATTGAGACGCACTCTCAGGATTTGATTGATCCTCACCTCATGCCTCTGCCGCCACCTCAGCAGTTTGCTGCATTCCAAGTCCTTGAGGTTGCCTTGCACTGCACCAAGACGACACCCCATGTGAGACCGTCTTCCCGCCAAGTCTGCGATCTTCTCCTTCATGTCTTCAGCAACAGAGTTCTTGACTTTGACAAGATGAATTTGAACCGCCACGAGTGA 3774 0.4417 MALPVRIVLLLLCFSSVLLLLCHGKSDSEGDDSSSTLRLLLEVKKSFMEDPENVLADWSENNTDYCSWRGITCGLNSMLVGLNLSDSSLTGSISPSLGLLRNLLQLDLSSNRLTGPLPPALSNITSLEFLLLFSNQLTGHIPTGLGSLASLRVLRIGDNPLTGPIPSSFGNLASLVTLGLASSSLTGSIPWQLGRLNQLENLVLQENELTGPIPPELGNCSNLTVFTAANNRLNGTLPSELGGLENLNLLNLANNSITGEIPSELRNLSQLGYLNLMGNQLEGRIPLSLAQLDNLKNLDLSFNKLVGGIPQELGNMGQLQYMVLSGNHLSGIIPRGLCSNLTSLEHLMLSDTALSGEIPSELSQCQSIKQLDLSNNSLNGSIPIELYGMTGLTDLLLNNNSLVGSISPFIGNLSNLETLALFHNNLQGSLPREIGMLAKLEILFLYDNQFSGEIPLEIGDCSGLQMIDFFGNKFGGEIPFTIGRLKDLNFLHLRQNQLVGEIPATLGNCHNLTILDLADNYLSGGIPSTFGLLKDLEQLMLYNNSLEGNLPHQLINLKNLTRVNLSKNRLNGSLSALCSSRNFLSFDVTNNAFDGEIPPQLGNSHSLERLRLGKNNLSGEIPRTLGKIEELSLLDLSENSLTGSIPAEISLCKKLAHIDLNNNMLSGPIPSWLGSLPQLGELKLSFNRFSGNLPSELFTCSKLLVLSLNSNSLNGTIPDDIGNLTSLNSLNVEQNNFSGPIPPAIGKLSKLYELRMARNSFNGEIPSELGRQQNLQSMLDLSYNNLSGEIPPFLGTLTKLEELDLSHNQLTGQVPLQVAEMSSLGKLDLSYNKLEGVLDEKFSHWPPKAFEGNPRLCGSPLKHCDTDGSRNHLLGLSITSLVIVSALSTLAAVALAILAVRMFMKNKQEFLRKGSQVNYVYSSSSSSSQAQRRPLFRYNRAVKQDIRWEDIMEATENLSDEFIIGTGGSGTIYRAEFPSGDTVAVKKISAKDDFMQNKSFVREVKTLGRIRHRHLVKLRGYCSNKNKGEGWNLLIYEFMENGSVWDWLHGKPEKTRRILDWEARFKIAVGLARGVEYLHHDCVPKIIHRDIKSSNVLLDSKMDAHLGDFGLAKELNIDNSNTESNTWFAGSYGYIAPECAYSVKATEKSDVYSMGIVLMELVSGKMPTDEAFGGEMDMVRWVEMNIETHSQDLIDPHLMPLPPPQQFAAFQVLEVALHCTKTTPHVRPSSRQVCDLLLHVFSNRVLDFDKMNLNRHE 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 917 1038 - -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 386 462 IPR032675 -
Accr5g00046 1257 ProSiteProfiles Leucine-rich repeat profile. 799 820 IPR001611 GO:0005515
Accr5g00046 1257 SUPERFAMILY L domain-like 46 359 - -
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 33 191 - -
Accr5g00046 1257 SUPERFAMILY L domain-like 310 645 - -
Accr5g00046 1257 PANTHER UNNAMED PRODUCT 530 1169 - -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 285 385 IPR032675 -
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 479 575 - -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 532 868 IPR032675 -
Accr5g00046 1257 Gene3D Phosphorylase Kinase; domain 1 917 1038 - -
Accr5g00046 1257 PRINTS Leucine-rich repeat signature 797 810 - -
Accr5g00046 1257 PRINTS Leucine-rich repeat signature 631 644 - -
Accr5g00046 1257 SUPERFAMILY L domain-like 604 863 - -
Accr5g00046 1257 SUPERFAMILY Protein kinase-like (PK-like) 944 1237 IPR011009 -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 463 531 IPR032675 -
Accr5g00046 1257 Gene3D Transferase(Phosphotransferase) domain 1 1039 1240 - -
Accr5g00046 1257 ProSitePatterns Protein kinases ATP-binding region signature. 964 987 IPR017441 GO:0005524
Accr5g00046 1257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1086 1098 IPR008271 GO:0004672|GO:0006468
Accr5g00046 1257 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Accr5g00046 1257 Pfam Leucine rich repeat 294 354 IPR001611 GO:0005515
Accr5g00046 1257 Pfam Leucine rich repeat N-terminal domain 39 73 IPR013210 -
Accr5g00046 1257 SMART serkin_6 958 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00046 1257 SMART LRR_sd22_2 797 818 - -
Accr5g00046 1257 SMART LRR_sd22_2 437 458 - -
Accr5g00046 1257 SMART LRR_sd22_2 533 559 - -
Accr5g00046 1257 SMART LRR_sd22_2 100 126 - -
Accr5g00046 1257 SMART LRR_sd22_2 292 311 - -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Accr5g00046 1257 Pfam Leucine Rich Repeat 150 172 IPR001611 GO:0005515
Accr5g00046 1257 FunFam Uncharacterized protein 385 478 - -
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 286 384 - -
Accr5g00046 1257 ProSiteProfiles Protein kinase domain profile. 958 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00046 1257 Pfam Protein kinase domain 963 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 192 285 - -
Accr5g00046 1257 FunFam Leucine-rich repeat receptor-like protein kinase 1039 1254 - -
Accr5g00046 1257 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 576 868 - -
Accr5g00046 1257 SMART LRR_typ_2 797 820 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 100 124 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 557 580 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 437 461 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 244 268 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 724 748 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 485 509 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 196 220 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 821 852 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 292 315 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 413 436 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 148 171 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 628 652 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 676 700 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 341 365 IPR003591 -
Accr5g00046 1257 SMART LRR_typ_2 316 340 IPR003591 -
Accr5g00046 1257 Gene3D Ribonuclease Inhibitor 35 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00046 Accr-Chr5 1199896 1204238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00046 40 701 Receptor kinase-like Gene Family AT1G17750 37.369 1.44e-104 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g00046 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00046 - - gmx:100801889 1748.79