Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00035 ATGCGTAACAATAGGGAGCTTTGTAGAAATTTTCAGCGAGGCAGCTGCCAATATGGAGAAAGGTGTAAATTTCTTCACAGTCTGCCACAACAGCAAAAACAAACAACCAATCCTTTTGGATTTGGGTCCCACTCCGGTTCCCAGCAACAGCATAAGACCAATCCTTTTGGCTTTGGTGTGCAGAATAGCTCCCAGTCAGCTGGGGGTGCTAATTCAGAATTCAAACACCAGTTCAAGCCTTTTGATAACAAATGGACTCGTCCTTCTTCCTCAGCCCAGAATAGTGCTTCGCGAACAACTGATACCAATTCTCGAGATCATAAGTGCACTGATCCTGAAACTTGCAAACGTCTGATTGTAGACGATTTTGAGCAAGAGAAAACACTGTGGAAGCTTACATGCTATGGTCATTGTAGAGGTGGTCCTTGTGACATTGTTGGTGATATTAGCTTTGAAGAATTGCGGGCAGCTGCATATGAGGATGCTAAACGTGGGATGACATTACAATCAATTGTTGAGAGAGAGAGAAATCTACTAAGTTCCAAGTTAGCGGAGTTTCAGAACCTTCTTCGTGAACCTTACAAAATACAGCTGAGTTCTTCTCTTACAAGTGATAAGTATCAATCTCCTGGAATTGATGCAAACCCATTTTCAAGGACTTCACAATATAATGATCCTCTTTCTGTCTCTAGCTTTAGTCAACTAGGGGCATCATTGAGGGGTATTGAAAGGCCATCTGCACCCCCAGTAGATACTTTGGCTCAACCTATCTCCTTTGAAAGTAGAGGAAATCCTTTGGCATCCAATGTGATAAACCAAACTGGCGGAGGCATTTCAGGTGACCAAATTAACCTCTTTCCCACATCAGCAGTAGTTCCAAAGTTTCCCAGCGTTACTCCACTGCAATCATTTATTGTGAGCAATGGGCCTAGTTCTGATACAATGTTTCCAGCAAGCATGGGTGTTCAGTTATCAAGCAAGTCCAATGAGAATGTCTCTGGAGATACCAGTATTTGGTTAAAAGAGAAATGGATTCCTGGAGAGATTCCGGAAGAAGCTCCTCCTGATGCCTTTGTAAGGTAG 1083 0.4294 MRNNRELCRNFQRGSCQYGERCKFLHSLPQQQKQTTNPFGFGSHSGSQQQHKTNPFGFGVQNSSQSAGGANSEFKHQFKPFDNKWTRPSSSAQNSASRTTDTNSRDHKCTDPETCKRLIVDDFEQEKTLWKLTCYGHCRGGPCDIVGDISFEELRAAAYEDAKRGMTLQSIVERERNLLSSKLAEFQNLLREPYKIQLSSSLTSDKYQSPGIDANPFSRTSQYNDPLSVSSFSQLGASLRGIERPSAPPVDTLAQPISFESRGNPLASNVINQTGGGISGDQINLFPTSAVVPKFPSVTPLQSFIVSNGPSSDTMFPASMGVQLSSKSNENVSGDTSIWLKEKWIPGEIPEEAPPDAFVR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00035 360 ProSiteProfiles Zinc finger C3H1-type profile. 2 29 IPR000571 GO:0046872
Accr5g00035 360 SUPERFAMILY CCCH zinc finger 4 30 IPR036855 GO:0046872
Accr5g00035 360 SMART c3hfinal6 3 28 IPR000571 GO:0046872
Accr5g00035 360 MobiDBLite consensus disorder prediction 33 72 - -
Accr5g00035 360 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 5 27 IPR000571 GO:0046872
Accr5g00035 360 Gene3D - 1 79 - -
Accr5g00035 360 MobiDBLite consensus disorder prediction 83 100 - -
Accr5g00035 360 PANTHER MAKORIN-RELATED 7 243 IPR045072 GO:0000209|GO:0061630
Accr5g00035 360 MobiDBLite consensus disorder prediction 33 109 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr5g00035 zf-CCCH 6.7e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00035 K14321 - gmx:100814339 402.519