Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00034 ATGGAGAAGAATATGGAGAAGCAGAAATCATCTGCTAATGATGATCATAATGCTGGTGAATTGGCATTCATTTCCTCTTATTCAGAAGACGGCAGGGATTCTGTGGACAAGTGGATGGCATTTCCTAGCCAGTCAAATTTTGCCAATTCTAGCAGCTCAATGAATATGGATCGTTATGGGCCTAACAATGGAAAGAAAGATAACGATGCAAGGGAGTCTCCGGATATGCAGGGGCCTTTTGATCATCAAATTTTAACTGAAGCAAGCATGGCGGAGAGAACTGCTGAATGGGGCCTTGTGATGAACTCAGGTAGTTTTAAAGCAATAGGAGGAGTGAAAACCAATTCCTCCTTTGACGGTGAAAGAAGCAAAAATTTGTCAGATAGATTCAATGCAGCAGTATCGACAAGGACATCTGAGGAATCAAATCATGGGTCAGAGTCATCATCAGGGGCATTCCCAAGGGTATCACAAGAGCTGAAGGAAGCCTTGGCGTCACTACAACAGACTTTTGTTGTCTCAGATGCAACTAAACCAGACTGCCCAATCATGTATGCCAGCAGTGGATTTTTCAGTATGACGGGTTATTCTTCAAAGGAGATCATTGGGAGGAATTGCCGGTTTCTTCAAGGCCCTGAAACAGACCCGAAAGAAGTGGCCAAAATTCGTGATGCAGTTAAAAATGGGAAAAGCTATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACCCCGTTCTGGAATCTTCTCACTGTCACTCCTATAAGAGATAGCCAGGGCAACGTCATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAATACACTGAAGGTGTGAATGAAAAGGCATTACGGCCAAATGGATTGCCCAAGTCATTAATTCGTTATGATGCCCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCAAACCGTGAGGGACCCAAAATCCACCATTCGGACTGTGAGTCACGACAATGCCAGTAAGCTTGAAGAGCAAGAAAAAACCAATTTTGATTTTGTTTTGCCAAAGTCTGCTGAAATTGAGAGTACTAGTTCAACAAAGAGGCAAACTGCTTCTCTAGACTTCCAAGGTGATAAAAGCAAACGAAAGTCAGGGCGCATATCTTTCATAAGTTTCAAAGGTAGATCTAGCTCTACAGGGAAGCATGATGAAAAGCCCATTGTTGAGCCAGAGGTTTTGATGACTAAGGACATGGAATGTACAGACAGTTGGGAGCGTGCTCAAAGAGAGAGGGACATACGACAGGGAATCGATCTAGCAACCACATTGGAGCGCATTGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGACAACCCAATTATCTTTGCATCTGATAGCTTTCTTGAACTTACAGAATATACACGAGAAGAAATTTTGGGAAGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAGCAACTGTCTCAAAGATTAGAGATGCTATAAGAGAACAGAGGGAAATCACCGTTCAGCTTATCAACTATACCAAGAGTGGTAAGAAGTTCTGGAACTTGTTCCACTTGCAACCTATGCGGGATCAAAAGGGTGAACTACAATACTTTATAGGCGTCCAATTAGATGGAAGTGATCATGTAGAACCTTTAAGAAACCGCCTATCTGAGAAAACAGAGAAACAAAGTGCAAAGTTGGTCAAAGCAACTGCAGAGAATGTTGATGAGGCTGTCCGAGAGCTTCCTGATGCTAACTTGAGTCCGGACGATTTGTGGGCAATTCATTCTCAGCCTGTCTTCCCAAGACCTCATAAAAAGGAAAGTTCTTCTTGGTTAGCAATACAAAAGTTAATTTCAAGTGGTGAAAAAATTGGACTGCATCATTTTAAACCAATAAGGCCACTGGGTTGTGGAGATACTGGCAGCGTTCACCTTGTGGAGCTTCAAGGTGCAGGCGAACTATATGCAATGAAGGCAATGGAAAAATCAGTCTTGCTAAATCGTAATAAGGTTCATCGAGCATGTATTGAGAGAGATATTATATCATTGCTAGATCATCCTTTTCTTCCCACACTATACACTTCTTTTCAGACTTCTACACATGTATGTTTGATAACAGACTTCTGCCCTGGTGGTGAAATGTTTGCTTTGTTAGATAAGCAACCCATGAAGATTTTCAGGGAGGAATCAGCAAGATTCTATGCAGCAGAGGTTGTTATTGGTTTAGAATACCTCCACTGCTTAGGTATAATTTATCGAGACCTAAAGCCTGAAAATATTTTACTTCAGAAGGATGGCCATATTGTATTAACTGATTTCGATTTGTCATTCATGACTGCTTGTAAACCCCATATTGTGAAGCCTCCTCCACCTAGCAGAAGATCGCGAAGTCAACCACCACCAACATTTGTTGCGGAGCCTAATGCACAATCTAACTCCTTTGTTGGAACAGAAGAATACATTGCTCCTGAAATTATAACTGGAGCTGGGCATAGCAGTGGCATAGATTGGTGGGCTCTTGGTATATTGTTGTATGAAATGCTCTACGGGCGCACACCATTCAGAGGAAAGAACAGACAGAAGACATTTGCCAACATCTTGCACAAAGATCTAACCTTTCCCAGCAGTATCCCGGTAAGTCTTGCAGCCAGGCAGTTGATTAATGCCCTACTGCAAAGAGACCCAGACAACCGTTTAGGTTCAGCTACTGGAGCTAATGAAATCAAACAGCATGCTTTTTTCCGAGGAATTAGTTGGCCTTTAATCCGTTGCATGAATCCACCACCTCTAGAAGCTCCTCTTAAGTTGATAGGAAAAGACCCAACCCAAAAAGAAGTGAAATGGGAAGATGACGGTGTGCTTGTTCGCTCAATGGATTTGGATATCTTCTGA 2886 0.4224 MEKNMEKQKSSANDDHNAGELAFISSYSEDGRDSVDKWMAFPSQSNFANSSSSMNMDRYGPNNGKKDNDARESPDMQGPFDHQILTEASMAERTAEWGLVMNSGSFKAIGGVKTNSSFDGERSKNLSDRFNAAVSTRTSEESNHGSESSSGAFPRVSQELKEALASLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEIIGRNCRFLQGPETDPKEVAKIRDAVKNGKSYCGRLLNYKKNGTPFWNLLTVTPIRDSQGNVIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKEKALGSITEVVQTVRDPKSTIRTVSHDNASKLEEQEKTNFDFVLPKSAEIESTSSTKRQTASLDFQGDKSKRKSGRISFISFKGRSSSTGKHDEKPIVEPEVLMTKDMECTDSWERAQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLRNRLSEKTEKQSAKLVKATAENVDEAVRELPDANLSPDDLWAIHSQPVFPRPHKKESSSWLAIQKLISSGEKIGLHHFKPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVLLNRNKVHRACIERDIISLLDHPFLPTLYTSFQTSTHVCLITDFCPGGEMFALLDKQPMKIFREESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHIVLTDFDLSFMTACKPHIVKPPPPSRRSRSQPPPTFVAEPNAQSNSFVGTEEYIAPEIITGAGHSSGIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAARQLINALLQRDPDNRLGSATGANEIKQHAFFRGISWPLIRCMNPPPLEAPLKLIGKDPTQKEVKWEDDGVLVRSMDLDIF 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00034 961 Gene3D Phosphorylase Kinase; domain 1 626 710 - -
Accr5g00034 961 ProSitePatterns Protein kinases ATP-binding region signature. 633 656 IPR017441 GO:0005524
Accr5g00034 961 ProSiteProfiles PAS repeat profile. 156 229 IPR000014 -
Accr5g00034 961 MobiDBLite consensus disorder prediction 62 76 - -
Accr5g00034 961 SUPERFAMILY PYP-like sensor domain (PAS domain) 177 269 IPR035965 -
Accr5g00034 961 Pfam Protein kinase domain 629 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00034 961 ProSiteProfiles Protein kinase domain profile. 627 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00034 961 MobiDBLite consensus disorder prediction 44 80 - -
Accr5g00034 961 CDD PAS 183 272 IPR000014 -
Accr5g00034 961 FunFam LOV domain-containing protein 626 710 - -
Accr5g00034 961 SMART pac_2 233 275 IPR001610 -
Accr5g00034 961 SMART pac_2 503 545 IPR001610 -
Accr5g00034 961 ProSiteProfiles PAS repeat profile. 426 499 IPR000014 -
Accr5g00034 961 FunFam Putative LOV domain-containing protein 170 326 - -
Accr5g00034 961 FunFam Putative LOV domain-containing protein 711 924 - -
Accr5g00034 961 CDD STKc_phototropin_like 625 935 - -
Accr5g00034 961 ProSiteProfiles PAC domain profile. 500 554 IPR000700 -
Accr5g00034 961 CDD PAS 449 541 IPR000014 -
Accr5g00034 961 MobiDBLite consensus disorder prediction 131 155 - -
Accr5g00034 961 SUPERFAMILY Protein kinase-like (PK-like) 605 935 IPR011009 -
Accr5g00034 961 SMART pas_2 158 227 IPR000014 -
Accr5g00034 961 SMART pas_2 428 497 IPR000014 -
Accr5g00034 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Accr5g00034 961 MobiDBLite consensus disorder prediction 783 806 - -
Accr5g00034 961 PANTHER FLIPPASE KINASE 1-RELATED 125 929 - -
Accr5g00034 961 ProSiteProfiles PAC domain profile. 230 284 IPR000700 -
Accr5g00034 961 SMART serkin_6 627 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g00034 961 MobiDBLite consensus disorder prediction 44 59 - -
Accr5g00034 961 Gene3D PAS domain 415 579 - -
Accr5g00034 961 NCBIfam PAS domain S-box protein 182 273 IPR000014 -
Accr5g00034 961 NCBIfam PAS domain S-box protein 452 544 IPR000014 -
Accr5g00034 961 Pfam PAS domain 177 273 IPR000014 -
Accr5g00034 961 Pfam PAS domain 449 541 IPR000014 -
Accr5g00034 961 SUPERFAMILY PYP-like sensor domain (PAS domain) 445 541 IPR035965 -
Accr5g00034 961 Gene3D PAS domain 170 340 - -
Accr5g00034 961 FunFam LOV domain-containing protein 415 579 - -
Accr5g00034 961 Gene3D Transferase(Phosphotransferase) domain 1 711 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00034 Accr-Chr5 867321 879136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00034 40 960 AGC Kinase Gene Family AT5G58140 71.915 0.0 1335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr5g00034 Pkinase 4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00034 K20715 - gmx:100804783 1482.62