Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00029 ATGGACCTAGTCAATGGAGGGAATAGTCTCACCAACAATCCCAATCTGAGCTCAAAGCAAAGGCTACGCTGGACACATGAGCTCCATGAACGCTTTGTTGATGCTGTGGCGCAGCTTGGTGGGCCTGATCGTGCCACACCTAAAGGTGTCCTCAGAGTGATGGGTGTACAAGGCTTAACAATATATCATGTCAAAAGTCATCTGCAGAAATATCGTCTTGCTAAATACCTCCCTGACTCCTTATCTGATGGGAAAAAAGCTGACAAGAAAGAAACAGGGGATATGCTTTCCGATCTGGATGGTTCGCCAGGGATGCAGATTACTGAAGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTAGAGGTTCAGAGACAGCTACAGCTTCGGATTGAAGCCCAGGGCAAATACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAGTGGTGTTCTTTCCCAAGCACCCGGCTCCGGGGATGCAGCCTCAGTGCCAGTTGACACTTGCCAAGACGCTGACAATAAGAATGACCCGTCAACCCCTGCCCCTTCATCTGAGTGCCCCCTTCAGGAAAAAGCTGCCAAGGAACGTGCTCTGGCAAAGAGTCTTTCAATGGACGAATCCTTTTCATCTCACAACGAACCATTAACACCAGATTCTGGCTGCCATGCTGGTTCCCCTACCAACAGCCCTAGAGGGAAGAGAATGACAAAAAAGCAGCGGGTGAGCACGGAGGGAGCATATTCTCAACCTGAGGTGGTGCTTCCACATCATATACTTGAGTCGAGCATGTCATCGAGTCAGTCATTAAACGGAGGGTTTCCTGCCGATGAGCCGTTTGATCCTTCACTAGGAATACCTACCAGAAGTAATGAGGAAATGGAGAAGGTTGGCGGCGGCAATCTGTAA 921 0.4897 MDLVNGGNSLTNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSLSDGKKADKKETGDMLSDLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSQAPGSGDAASVPVDTCQDADNKNDPSTPAPSSECPLQEKAAKERALAKSLSMDESFSSHNEPLTPDSGCHAGSPTNSPRGKRMTKKQRVSTEGAYSQPEVVLPHHILESSMSSSQSLNGGFPADEPFDPSLGIPTRSNEEMEKVGGGNL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00029 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 76 IPR017930 -
Accr5g00029 306 MobiDBLite consensus disorder prediction 82 103 - -
Accr5g00029 306 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Accr5g00029 306 Coils Coil 108 128 - -
Accr5g00029 306 MobiDBLite consensus disorder prediction 82 96 - -
Accr5g00029 306 MobiDBLite consensus disorder prediction 173 190 - -
Accr5g00029 306 FunFam Myb family transcription factor 18 76 - -
Accr5g00029 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 293 IPR044848 GO:0003700
Accr5g00029 306 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 74 IPR006447 GO:0003677
Accr5g00029 306 Pfam MYB-CC type transfactor, LHEQLE motif 105 151 IPR025756 -
Accr5g00029 306 Gene3D - 18 77 - -
Accr5g00029 306 MobiDBLite consensus disorder prediction 156 306 - -
Accr5g00029 306 MobiDBLite consensus disorder prediction 208 237 - -
Accr5g00029 306 Pfam Myb-like DNA-binding domain 22 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00029 Accr-Chr5 816718 819489 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00029 54 306 G2-like Transcription Factor Family AT2G01060 62.500 5.67e-97 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g00029 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00029 - - tcc:18597377 448.358