Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02775 ATGGCAAAAAGTCCTGATTATTCAGATCCACTCAGATGGGGGGAGGCAGCAGACTCACTCAAGGGAAGCCACTTGGACGAAGTAAGATCCATGGTGGCCGACTACCGGAGGGCCGTTGTCCATCTGGGCAGCACGTGGCTGTCGATTTCGCAGGTGGCGGCGGTGGCTAACCTCAGCTCCAACGTGAAGGTGCTGCTATTGGAGTCAGCGAGGGCCGGCGTGAAGGTGAGCAGTGATTGGATAATGGAAAGCGTTAAGAATGGGACTCCCATTTACGGTGTCACCACTGGCTTTGGTGCTGCTTCTCACAGGCGAACCGACCAAGTCGCTGCTCTTCAAAAGGAGCTTGTGAGATTCTTTAACTGTGCAATATTCGACAAGGGAAAAGACACGAGACACACTCTGCCTCAGGCGGCAAGCAGAGCAGCGATGCTAGTGAGGGTGAACACTTTGCTTCAAGGCTACTCAGGCCTTCGGTTTGAGATGTTAGAAGCAATCACCAAACTGCTTAACCACAACGTCACTCCTTGCTTGCCCCTCCGTGGCACCATCACCGCTTCCGGCGACCTCATCCCTCTTTCCTTCATTGTCGCTTTGCTTGTTGGACGCCCTAACTCACAGGCCATTGGACCTTCTGGGGAGTTCCTTACTCCTAAGCAAGCTTTCCTCCTAGCCGGCATCAATGCCCACCATACCACTACAGATGATGAGAGAGACACAGACATCGGTGGCTCCCACGAAGACAGGGTCAAGTTCTTTGAATTGTAG 768 0.5326 MAKSPDYSDPLRWGEAADSLKGSHLDEVRSMVADYRRAVVHLGSTWLSISQVAAVANLSSNVKVLLLESARAGVKVSSDWIMESVKNGTPIYGVTTGFGAASHRRTDQVAALQKELVRFFNCAIFDKGKDTRHTLPQAASRAAMLVRVNTLLQGYSGLRFEMLEAITKLLNHNVTPCLPLRGTITASGDLIPLSFIVALLVGRPNSQAIGPSGEFLTPKQAFLLAGINAHHTTTDDERDTDIGGSHEDRVKFFEL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02775 255 Pfam Aromatic amino acid lyase 47 228 IPR001106 -
Accr4g02775 255 Gene3D - 2 235 IPR024083 -
Accr4g02775 255 SUPERFAMILY L-aspartase-like 9 229 IPR008948 GO:0003824
Accr4g02775 255 PANTHER HISTIDINE AMMONIA-LYASE 9 229 IPR001106 -
Accr4g02775 255 FunFam Phenylalanine ammonia-lyase 1 237 - -
Accr4g02775 255 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 182 198 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02775 Accr-Chr4 58319619 58322136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02775 8 228 Monolignol Biosynthesis Gene Families AT3G53260 67.873 1.80e-103 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02775 K10775 - lang:109356181 316.62