Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02772 ATGTCGATTGGAGAGCTTGCCTGCTCTTACGCTGTTGTGCTTCCTCACGACGATGGCATCCCAATAACTGCTGAGACGATCTCAACGGTGCTTAAGGCAGCAAAAGTTGATATTGAATCTTATTGGCCAAGTTTATTTGCTAAGCTTGCTGAGAAGAGAAACATTGAGGATGTGATCTTGAATTCTGCAGGTGGTGGGGCTCCGGTTGCTGTTGCTGGTGCTCCAGCTGCCGCTGGTGGTGGAGCTGTTCCTGCTGCTGAGGAGAAGAAGGATGAACCCCAAGAAGAGAGTGATGGTGACATGGGCTTCAACTTGTTTGATTAG 324 0.4907 MSIGELACSYAVVLPHDDGIPITAETISTVLKAAKVDIESYWPSLFAKLAEKRNIEDVILNSAGGGAPVAVAGAPAAAGGGAVPAAEEKKDEPQEESDGDMGFNLFD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02772 107 CDD Ribosomal_P1 5 106 - -
Accr4g02772 107 FunFam 60S acidic ribosomal protein P1 1 63 - -
Accr4g02772 107 MobiDBLite consensus disorder prediction 74 107 - -
Accr4g02772 107 Hamap 50S ribosomal protein L12 [rpl12]. 6 107 IPR027534 GO:0003735|GO:0005840|GO:0006414
Accr4g02772 107 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 107 - -
Accr4g02772 107 Gene3D - 1 62 IPR038716 -
Accr4g02772 107 Pfam 60s Acidic ribosomal protein 22 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02772 Accr-Chr4 58064381 58064704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02772 1 107 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 53.982 1.06e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02772 K02942 - mnt:21402570 136.346