Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02747 ATGAAACATCGATCAGATGATGAGAGAGGCACAGACATCGGTGGCTCCCACGAGGAGAGGGTCAAGTTCTTCGAATTGCAGCCAAAGGAAGGCCTTGCTATTGTAAACGGCACAGCCGTTGGATCTGGATTGGCTTCGGTGGTGCTTTTTGAAGCAAACATCTTAGCTTTATTGTCACAAGTCACATCTGCCATTTTTGCTGAAGTGATGCATGCCAAACCAGAATTCACCCACCACATGATTCACAACCTTAAGCACCATCCTGGTCAGATAGAAGCAGCTGCAATTATGGAACACATTCTAGAAGGTAGCTCTTATGTGAAGCAATATCCTCAGAAATCACAAAAGCCCAGGAAAGAACGATACGCTCTTGTAACTTCCCCTCAATGGCTTGGACCACAGATTGAAGTCATCAGATATTCTACAAAGTCCATTGAGAGGGAGATTAACTCTGTGAACGACAATCCTTTAATTGACGTTTCAAGTAACAAGGCTTTCCATGGAGGTAACTTCCAAGGCACACCCATTGGAGTTTCAATGGACAACACGCGTTTAGCTGTGGCTTCCATAGGAAAACTTGTGTTTGCACAGTTCACTGAGCTAGTAATCGACCTGTATAACAATGGGTTGCCTTCTAATCTCTCTGCTTCTAGAAACCCAAGCTTGGATTATGGCTTTAAAGCTTGTGAAGTTGCTATGGCCTCTTACTGTTCTGAGCTTCAGTTTTTGGCAAATCCTGTGACCAATCACGTGCAAAGCGCAGAACATCACAACCAAGATGTGAACTCTTTGGGTCTAATTTCTGCCAGAAAAACCAGTGAGGCTATTGAGATCTTGAAGCTAATGTGCTCAACTTATTTGGCTGCACTATGCCAAGCTATTGACCTTAGGCACCTGGAAGAAATCTTCATTATCACAGTGAAAAACACTATAAGCCAAGTTACAGAAAAGATATTCTCAGGCACAGATCAAAACCCATTTCCGCTCTGTGAAGAGGATTTACTTAAAGTGGTCGATAACGAGTATGTGTTTTCCTACATTGATGATCCCCTCAATGCTTCATACCCATTTATGCCAAAACTGAAACAAGTCCTTTATGAGAAGGCACACAAGAATGCTGTGAAAGAGAGGAATAATAATACTGTGAACAGTAGTGGTGCTTCAGTTTTTGAGAAGATTGAGGATTTTGAGGAAGAACTAAAGCTTGTTTTGCCAAAGGAAGTTGAAAGGGCAAGGGTGGGTTATGAGAATGGCAAGCCAGCAATTCCAAATAGGATTAAGGAGTGTAGGTCATACCCATTATACAAGTTTGTGAGGGAAGAATTGAACACTGGATTGCTTAGTGGAGAGAAGATCAAGTCACCTGATGAGGACTTTGATAAAGTGTTTAGAGCAATTTGTGAAGCAAGGATTGTTGATCCACTTTTGGAGTGCCTTGCAAATTGGAAAGGAGTTCCCATTTCAATGTAA 1470 0.4211 MKHRSDDERGTDIGGSHEERVKFFELQPKEGLAIVNGTAVGSGLASVVLFEANILALLSQVTSAIFAEVMHAKPEFTHHMIHNLKHHPGQIEAAAIMEHILEGSSYVKQYPQKSQKPRKERYALVTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVSSNKAFHGGNFQGTPIGVSMDNTRLAVASIGKLVFAQFTELVIDLYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTNHVQSAEHHNQDVNSLGLISARKTSEAIEILKLMCSTYLAALCQAIDLRHLEEIFIITVKNTISQVTEKIFSGTDQNPFPLCEEDLLKVVDNEYVFSYIDDPLNASYPFMPKLKQVLYEKAHKNAVKERNNNTVNSSGASVFEKIEDFEEELKLVLPKEVERARVGYENGKPAIPNRIKECRSYPLYKFVREELNTGLLSGEKIKSPDEDFDKVFRAICEARIVDPLLECLANWKGVPISM 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02747 489 CDD PAL-HAL 21 297 IPR001106 -
Accr4g02747 489 Pfam Aromatic amino acid lyase 19 299 IPR001106 -
Accr4g02747 489 PANTHER HISTIDINE AMMONIA-LYASE 22 488 IPR001106 -
Accr4g02747 489 Gene3D Fumarase/aspartase (Central domain) 39 484 - -
Accr4g02747 489 Gene3D - 300 424 IPR023144 -
Accr4g02747 489 SUPERFAMILY L-aspartase-like 23 487 IPR008948 GO:0003824
Accr4g02747 489 NCBIfam phenylalanine ammonia-lyase 22 479 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02747 Accr-Chr4 56968308 56969777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02747 23 487 Monolignol Biosynthesis Gene Families AT2G37040 70.253 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02747 K10775 - gmx:100787872 719.153