Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02711 ATGTCTGTGAATCGGAAGTTCACTGGGTCAAATGGCAGGATGCCACTGAATTCCAAGTCCGGTAAGTCAAATGAAGCTTCGAATGAGTCTAATTCTTCACTCAGGAAATGCAAGAAGAAGAAGCCCTTTTTCGTGTGGGGTTTTCTTGGTGTTGTTGCGCTGGGAATTGTGTGGTTCTTCATCAGTTCTCACAGTGACTCGTTCATGTTGAGGAAGGAGAAAAGGTTGGGTGATTGTGAAGAGAGAGCTCGAATCTTGCTCCAACGTCACAATATCAGCAAAAAGCAACTTCATGCTTTCGTTTCCTTCTTCTCTGTATCAGATCAGATTTTATCCCAATGTATCGATGAAAGAAGAGTGCAAAAGCTGTTAAGCAGTGACCTTGGCAATAACTTGCAGATGATATTTTCAGAGAATAGGGAGTTCCATAAGGAGCATACAGGTGTCACAGGCCAATTCGAACTTATGGAACAATGTCCAGTTCTCAATGATTCTGTTCAGAGAAACCTGGAATCGTTACTGCTAATGGAAAAAACTGTATCATTGGCCCCATACTCTGCTATCATGTCCAATTTTGTCAAAAATTTGTTGCATGGAAAGAACATTGTGCAGTCATGGGTATTGGAGTTAGTTGCAATTCAGGGTTATTTGACTCTCTGTATAGGATACTGGTGGATTCTCGTTGTAATTACAATTTGTTGTAGATTGGCTGGCTTTCCTTTATTTTGGAATCAGAAGCTGGTTTCACAGCCTAAACAGTCACAACATTCTGCTGGGCAAAATCCAAAGGGTGCTGGGAGTTGGAGGAAAAAGCTTTTAGTTACATTTGTGTTACTTGGAATAGTTGGGTCCGTTTGGTTATTCTGGCACCTGAATAATGATATTATGCGGAGGAGAAAAGAAATGCTTACCAATATGTGTGATGAGCGAGCTCGCATGCTGCAGGATCAGTTCAATGTGAGCATGAACCACGTTCATGCTCTGGCTATTCTTGTGTCCACCTTTCACCACAGTAAACATCCATCTGCTATTGACCAGAAAACTTTTGGAGAATATACAGAGAGAACATCATTTGAAAGACCACTCACTAGTGGTGTTGCTTATGCTCTGAAAGTTCTCCATTCTGACAGGGAGCATTTTGAAAAGCAGCATGGGTGGACAATTAAGAAAATGGAAGCTGAGAATGAAACACTTGTCCAAGATTGTATTCCGGAAAATCTCAATCCTGCACCCATTCAAGATGAATATGCACCAGTGATATTTGCTCAAGAAACTGTTTCCCATATTGTATCTATTGATATGATGTCTGGAAAGGAAGACCGTGAGAATATCTTGCGAGCAAGAGCAACCGGAAAGGGAGTGCTAACATCTCCTTTCAAACTGCTGAAGTCCAGTCACCTGGGTGTTGTCCTTACATTTGCTGTCTACAATGCTAATTTTCCTCCAAATGCTACACCAGAGCAACGCATTGAAGCTACTGTTGGGTACTTGGGTGCGTCCTATGACGTTCCATCACTGGTAGACAAGCTCCTCCACCAACTTGCCAGCAAGCAAACCATTGTTGTAAATGTTTATGATACAACGAATGCTTCTGCACCTATCAAAATGTATGGTACTGATGTTATTGATACTGGCTTACTACATATAAGCAATGTGGATTTTGGGGATCCTACGCGAAAACATGAGATGCATTGCAGGTTCAAGCACAAGCCTCCACTACCTTGGACAGCAATCAATGCATCAGTTGGGGTGCTTGTTATCACTTTGCTTCTTGGTCATATTTTTTATGCAGCAATCAGTCGAATAGCAAAAGTGGAGGATGACTACCGTGAAATGAGGGAGCTAAAGGTTCGAGCTGAAGCTGCAGATGTAGCAAAATCTCAGTTTCTGGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAACTAGATGAAAGCCAGATGGATTGTGCTCAGACTGCTCACAAGAGTGGTAAAGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGGAAGCTTGAACTTGAAGCTGTAGAATTTGATCCACGTTCTATCCTAGATGAAGTCCTGTCACTTTTCTCTGGAAAATCTAATGAAAAAAGAATTGAGTTGGCTGTTTATGTATCCAAAAGGGTGCCAGCAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAATAATTACTAACCTGGTTGGAAATTCACTTAAGTTCACTCATGATAAAGGACATGTGTTTGTATCGGTCCATATGGCAAATGAAGTAGAGAGCCCACTTCACGATATGGATGTAGTGCTGAGTCAAGGGTTCCGGGACATGTCAGACATAACCTATAATACATTGAGTGGTATTCCTGTTGTCAATAGATGGAAAAGCTGGGCAAATTTCAAAAAGTTAAGCAGTATGAATCTGATGGATGAGTCTGGAGTGATTCAATTGCTAGTGACAGTTGAGGATACAGGTATAGGAATTCCTTTGGAAGCACAACACCGCATATTCACCCCTTTTATGCAAGCTGATAGTTCCACCTCACGAACATATGGTGGGACTGGAATAGGACTGAGCATTGGTAAATGTTTAGTCGACCTCATGAGAGGAGAAATTGGATTTGTAAGTGAACCTGAAATTGGCAGTACCTTTTCTTTTAGTGCAACTTTCAGGATGCCAAAAGCCTCACATCAGGATACAAAGCGGCAGCAGTGCAATCCTTTTGTTTCAGAATGTAAAGGATTGAGAGCACTTGTGGTGGATAGAAGAAAAATTCGCGCTGAAGTTACGAGATATTATCTGCAGAGGTTGGGAATGTCTGTGGATGTTGCTTATAGTCTTAACTCAGCTTACTCTTATCTATCGGGTTCTTCCAACAAGAGGATTTCTCAACAGTTGGAAATGATTGTGATAGACAAGGACGCTTTGGATAAAGAAAGTAGTCTATTATATGTAATCAAGAAGCAGAGGCAGAATGACATCAAAAGAGACCCAAAAAGTTTTCCCAAGATTTTTCTCTTGGCAAACAACAACCTTAGTCCTGATGAACATGGTGAGCTGAAATCTGTTGGTGTTGTAGATGGTATACTAATGAAGCCTCTTTGGTTTAGTATTTTGATTCGCTCCTACCGAGAAGCCCTTGGAAGTGAGAAGAAGCAAATAATTAGACAGAAAGAACCGAACCTTGGGAACTTGCTAAGACAGAAACATATTTTGGTGGTTGACGATAATGCAGTGAACCGAAAAGTAGCAGAAGGTGTGCTACGAAGATATGGGGCAAAAGTAACCTGTGTGGAGGGCGGCAGGGCGGCCTTAAAGATACTTATGCCACCACATAGTTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGGTTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAAAGAGTTCAATGAAAAAATTGCACGTGGCGAAGCATCAACAGAGATGTTTGGTAATGTGGCTCATTGGCACATGCCGATATTGGCCATGACAGCTGATGCAACTCAAGCTTCAATAGAAGAGTGCGATAGGTGTGGGATGGATGACTATGTGTTGAAGCCATTTGAAGAAGAACAGCTCTACAAAGCGGTGGCACGTTGCTTTGGGTCTGGTTGA 3675 0.418 MSVNRKFTGSNGRMPLNSKSGKSNEASNESNSSLRKCKKKKPFFVWGFLGVVALGIVWFFISSHSDSFMLRKEKRLGDCEERARILLQRHNISKKQLHAFVSFFSVSDQILSQCIDERRVQKLLSSDLGNNLQMIFSENREFHKEHTGVTGQFELMEQCPVLNDSVQRNLESLLLMEKTVSLAPYSAIMSNFVKNLLHGKNIVQSWVLELVAIQGYLTLCIGYWWILVVITICCRLAGFPLFWNQKLVSQPKQSQHSAGQNPKGAGSWRKKLLVTFVLLGIVGSVWLFWHLNNDIMRRRKEMLTNMCDERARMLQDQFNVSMNHVHALAILVSTFHHSKHPSAIDQKTFGEYTERTSFERPLTSGVAYALKVLHSDREHFEKQHGWTIKKMEAENETLVQDCIPENLNPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSSHLGVVLTFAVYNANFPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAPIKMYGTDVIDTGLLHISNVDFGDPTRKHEMHCRFKHKPPLPWTAINASVGVLVITLLLGHIFYAAISRIAKVEDDYREMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDCAQTAHKSGKDLISVINEVLDQAKIEAGKLELEAVEFDPRSILDEVLSLFSGKSNEKRIELAVYVSKRVPAVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSVHMANEVESPLHDMDVVLSQGFRDMSDITYNTLSGIPVVNRWKSWANFKKLSSMNLMDESGVIQLLVTVEDTGIGIPLEAQHRIFTPFMQADSSTSRTYGGTGIGLSIGKCLVDLMRGEIGFVSEPEIGSTFSFSATFRMPKASHQDTKRQQCNPFVSECKGLRALVVDRRKIRAEVTRYYLQRLGMSVDVAYSLNSAYSYLSGSSNKRISQQLEMIVIDKDALDKESSLLYVIKKQRQNDIKRDPKSFPKIFLLANNNLSPDEHGELKSVGVVDGILMKPLWFSILIRSYREALGSEKKQIIRQKEPNLGNLLRQKHILVVDDNAVNRKVAEGVLRRYGAKVTCVEGGRAALKILMPPHSFDACFMDLQMPEMDGFEVTRQIRCLEKEFNEKIARGEASTEMFGNVAHWHMPILAMTADATQASIEECDRCGMDDYVLKPFEEEQLYKAVARCFGSG 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02711 1224 PANTHER TWO-COMPONENT HISTIDINE KINASE 274 1215 - -
Accr4g02711 1224 SUPERFAMILY CheY-like 1081 1221 IPR011006 -
Accr4g02711 1224 CDD HATPase_EvgS-ArcB-TorS-like 742 904 - -
Accr4g02711 1224 Gene3D - 924 1072 - -
Accr4g02711 1224 Gene3D - 291 343 - -
Accr4g02711 1224 Gene3D - 64 108 - -
Accr4g02711 1224 FunFam Histidine kinase 4 597 688 - -
Accr4g02711 1224 Pfam Response regulator receiver domain 1085 1217 IPR001789 GO:0000160
Accr4g02711 1224 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 737 902 IPR003594 -
Accr4g02711 1224 SMART REC_2 1083 1217 IPR001789 GO:0000160
Accr4g02711 1224 ProSiteProfiles Response regulatory domain profile. 1084 1221 IPR001789 GO:0000160
Accr4g02711 1224 MobiDBLite consensus disorder prediction 1 33 - -
Accr4g02711 1224 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 610 691 IPR036097 GO:0000155|GO:0007165
Accr4g02711 1224 CDD HisKA 625 686 IPR003661 GO:0000155|GO:0007165
Accr4g02711 1224 Gene3D - 689 909 IPR036890 -
Accr4g02711 1224 ProSiteProfiles CHASE domain profile. 340 564 IPR006189 -
Accr4g02711 1224 CDD REC_hyHK_CKI1_RcsC-like 1085 1217 - -
Accr4g02711 1224 Gene3D - 1078 1223 - -
Accr4g02711 1224 SMART CHASE_2 340 539 IPR006189 -
Accr4g02711 1224 FunFam Histidine kinase 4 344 571 - -
Accr4g02711 1224 Gene3D - 597 688 - -
Accr4g02711 1224 SUPERFAMILY CheY-like 925 1061 IPR011006 -
Accr4g02711 1224 SMART HKATPase_4 737 906 IPR003594 -
Accr4g02711 1224 ProSiteProfiles Response regulatory domain profile. 930 1061 IPR001789 GO:0000160
Accr4g02711 1224 Pfam CHASE domain 343 537 IPR006189 -
Accr4g02711 1224 MobiDBLite consensus disorder prediction 1 31 - -
Accr4g02711 1224 PRINTS Bacterial sensor protein C-terminal signature 890 903 IPR004358 GO:0016310|GO:0016772
Accr4g02711 1224 PRINTS Bacterial sensor protein C-terminal signature 866 884 IPR004358 GO:0016310|GO:0016772
Accr4g02711 1224 PRINTS Bacterial sensor protein C-terminal signature 849 859 IPR004358 GO:0016310|GO:0016772
Accr4g02711 1224 PRINTS Bacterial sensor protein C-terminal signature 831 845 IPR004358 GO:0016310|GO:0016772
Accr4g02711 1224 ProSiteProfiles Histidine kinase domain profile. 632 906 IPR005467 -
Accr4g02711 1224 Coils Coil 602 622 - -
Accr4g02711 1224 SMART HisKA_10 625 690 IPR003661 GO:0000155|GO:0007165
Accr4g02711 1224 Pfam His Kinase A (phospho-acceptor) domain 625 690 IPR003661 GO:0000155|GO:0007165
Accr4g02711 1224 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 679 901 IPR036890 -
Accr4g02711 1224 Gene3D CHASE domain 344 571 IPR042240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02711 Accr-Chr4 55700244 55709648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02711 40 171 Miscellaneous Gene Families AT5G35750 27.465 3.33e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr4g02711 CHASE 8.8e-35 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02711 K14489 - gmx:100805107 1696.79