Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02709 ATGGTTTCTTCAGACAAAAGTGCTGATCGCAATGTTTCTTCTGATAAGTTGCATCAGAGGCTGAGTTCTCAAAGTGATATTACTGTGTCACAAAAGACTTGTGATGATAAAATTGATTCATCCAACCCGGAGAGAGCAGGAAGAATTCCTTCTGTTGCATCTGAGAAAGAAGTGCAGGATTCAGATGCCACTCCCGATGCACTGCAATCAGATCAAGAAGGAAGTGCTTGTACTTCACCCCTTCAGAGATCTTTGCAGAGTCCTAACACTGATCAGCGTCCATTGCAATCTAGGAAATCGGAGCAGAGGAGTACATGCTCTTTAACTGAGAAACCCTTGCAAAATCATAGTTCCATTCCACGTGCATTACATTGTGGTCAGGACAGTCCCTCCATAGCACGTGAAAAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTTAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAATTGCCCAGCGAAGAAGCAATTGGAGCGGTCAAATAATGGACAGATTATAGATACCTTCTGCATCGGGCAGCATAATCATCCCCAAGTGAACAGTTTACGACCTGTCGAAGAAAAATCAAACAAGCCCTCTCTAGCTGAAATGAAAGAGAAAACATCCATTGAGCATGGATGTGTGCCTCAGCAGATCAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATGAATCAGGTCAAAGCTGCACCTTTACAGTCGATTAGAACAAGTGATGTGGTTCTCGCCAATGAGGATCCTGAGCCAAAACGCCTGAAGATAAAAAATATTAATGCTGATGCCCCTGTGATTGAGAAGTCAGTTGGTGAATCTCGTTTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTATCGGTGGCGCAAGTATGGGCAAAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTACTATCGGTGCTCAAGTCCCGGCTGCCCTGTCAAAAAGCACGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCACGAAAGCCCCTCCGGAAGGACTGTTATTCATAACGGAGCGGCAGATACTTCCACAGCGATCATCAACAGCGACTCGGGAACCAAATCCAGGGAAAACTCTGTTTGTGTTCATCCAGCAAAACAACAGTCACAGGAGCAGCCAAATCCGAATGCTGAGCAAATTGCTAAACCAAAGACTTGTGATATGGATGAATCTCAAGAGATTGATACTCAAGTCTCTGAAAGTGAGAAAGAACAGAATGGCAACATGGGTGTGGGAAATGATTCAGGTTCTGAGCCTCCATGTAGATTAAATAAACAGCAGAAAGATGAGCAGGTGAGAACCATATCAGAAGAAGGCAAGTTAAACAAGCAATCTGAAGCTGATGCAGAACCTGTCCAAAACTAA 1470 0.4286 MVSSDKSADRNVSSDKLHQRLSSQSDITVSQKTCDDKIDSSNPERAGRIPSVASEKEVQDSDATPDALQSDQEGSACTSPLQRSLQSPNTDQRPLQSRKSEQRSTCSLTEKPLQNHSSIPRALHCGQDSPSIAREKVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLERSNNGQIIDTFCIGQHNHPQVNSLRPVEEKSNKPSLAEMKEKTSIEHGCVPQQIKSLETHPVSTVSTMNQVKAAPLQSIRTSDVVLANEDPEPKRLKIKNINADAPVIEKSVGESRFVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGRTVIHNGAADTSTAIINSDSGTKSRENSVCVHPAKQQSQEQPNPNAEQIAKPKTCDMDESQEIDTQVSESEKEQNGNMGVGNDSGSEPPCRLNKQQKDEQVRTISEEGKLNKQSEADAEPVQN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02709 489 ProSiteProfiles WRKY domain profile. 299 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 MobiDBLite consensus disorder prediction 17 36 - -
Accr4g02709 489 SUPERFAMILY WRKY DNA-binding domain 135 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 SUPERFAMILY WRKY DNA-binding domain 296 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 ProSiteProfiles WRKY domain profile. 133 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 MobiDBLite consensus disorder prediction 380 414 - -
Accr4g02709 489 FunFam WRKY transcription factor 127 198 - -
Accr4g02709 489 MobiDBLite consensus disorder prediction 1 130 - -
Accr4g02709 489 MobiDBLite consensus disorder prediction 63 124 - -
Accr4g02709 489 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 Pfam WRKY DNA -binding domain 305 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 398 IPR044810 GO:0003700
Accr4g02709 489 SMART WRKY_cls 138 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 SMART WRKY_cls 304 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 MobiDBLite consensus disorder prediction 380 489 - -
Accr4g02709 489 MobiDBLite consensus disorder prediction 458 480 - -
Accr4g02709 489 MobiDBLite consensus disorder prediction 418 435 - -
Accr4g02709 489 Gene3D WRKY domain 291 357 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02709 489 FunFam WRKY transcription factor 57 290 364 - -
Accr4g02709 489 Gene3D WRKY domain 129 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02709 Accr-Chr4 55666226 55669741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02709 56 377 WRKY Transcription Factor Family AT2G04880 47.198 9.90e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g02709 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02709 K18834 - gmx:100782726 459.914