Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02708 ATGGTTTCTTCAGACAAAAGTGCTGATCGCAATGTTTCTTCTGATAAGTTGCATCAGAGGCTGAGTTCTCAAAGTGATATTACTGTGTCACAAAAGACTTGTGATGATAAAATTGATTCATCCAACCCGGAGAGAGCAGGAAGAATTCCTTCTGTTGCATCTGAGAAAGAAGTGCAGGATTCAGATGCCACTCCCGATGCACTGCAATCAGATCAAGAAGGAAGTGCTTGTACTTCACCCCTTCAGAGATCTTTGCAGAGTCCTAACACTGATCAGCGTCCATTGCAATCTAGTGAGGAAAGTCCCTCTATAATATGCGAAAAGAGTTCAAAAGACTGTGTAGCTGAATCTGATGCTACTGCCATTGCAGGGAAATCGGAGCAGAGGAGTACATGCTCTTTAACTGAGAAACCCTTGCAAAATCATAGTTCCATTCCACGTGCATTACATTGTGGTCAGGACAGTCCCTCCATAGCACGTGAAAAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAAAATGTTAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAATTGCCCAGCGAAGAAGCAATTGGAGCGGTCAAATAATGGACAGATTATAGATACCTTCTGCATCGGGCAGCATAATCATCCCCAAGTGAACAGTTTACGACCTGTCGAAGAAAAATCAAACAAGCCCTCTCTAGCTGAAATGAAAGAGAAAACATCCATTGAGCATGGATGTGTGCCTCAGCAGATCAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATGAATCAGGTCAAAGCTGCACCTTTACAGTCGATTAGAACAAGTGATGTGGTTCTCGCCAATGAGGATCCTGAGCCAAAACGCCTGAAGATAAAAAATATTAATGCTGATGCCCCTGTGATTGAGAAGTCAGTTGGTGAATCTCGTTTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTATCGGTGGCGCAAGTATGGGCAAAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTACTATCGGTGCTCAAGTCCCGGCTGCCCTGTCAAAAAGCACGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCACGAAAGCCCCTCCGGAAGGACTGTTATTCATAACGGAGCGGCAGATACTTCCACAGCGATCATCAACAGCGACTCGGGAACCAAATCCAGGGAAAACTCTGTTTGTGTTCATCCAGCAAAACAACAGTCACAGGAGCAGCCAAATCCGAATGCTGAGCAAATTGCTAAACCAAAGACTTGTGATATGGATGAATCTCAAGAGATTGATACTCAAGTCTCTGAAAGTGAGAAAGAACAGAATGGCAACATGGGTGTGGGAAATGATTCAGGTTCTGAGCCTCCATGTAGATTAAATAAACAGCAGAAAGATGAGCAGGTGAGAACCATATCAGAAGAAGGCAAGTTAAACAAGCAATCTGAAGCTGATGCAGAACCTGTCCAAAACTAA 1548 0.4283 MVSSDKSADRNVSSDKLHQRLSSQSDITVSQKTCDDKIDSSNPERAGRIPSVASEKEVQDSDATPDALQSDQEGSACTSPLQRSLQSPNTDQRPLQSSEESPSIICEKSSKDCVAESDATAIAGKSEQRSTCSLTEKPLQNHSSIPRALHCGQDSPSIAREKVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLERSNNGQIIDTFCIGQHNHPQVNSLRPVEEKSNKPSLAEMKEKTSIEHGCVPQQIKSLETHPVSTVSTMNQVKAAPLQSIRTSDVVLANEDPEPKRLKIKNINADAPVIEKSVGESRFVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGRTVIHNGAADTSTAIINSDSGTKSRENSVCVHPAKQQSQEQPNPNAEQIAKPKTCDMDESQEIDTQVSESEKEQNGNMGVGNDSGSEPPCRLNKQQKDEQVRTISEEGKLNKQSEADAEPVQN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02708 515 MobiDBLite consensus disorder prediction 406 515 - -
Accr4g02708 515 MobiDBLite consensus disorder prediction 17 36 - -
Accr4g02708 515 MobiDBLite consensus disorder prediction 444 461 - -
Accr4g02708 515 ProSiteProfiles WRKY domain profile. 325 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 424 IPR044810 GO:0003700
Accr4g02708 515 SMART WRKY_cls 164 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 SMART WRKY_cls 330 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 MobiDBLite consensus disorder prediction 484 506 - -
Accr4g02708 515 FunFam WRKY transcription factor 57 316 390 - -
Accr4g02708 515 ProSiteProfiles WRKY domain profile. 159 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 MobiDBLite consensus disorder prediction 1 105 - -
Accr4g02708 515 MobiDBLite consensus disorder prediction 406 440 - -
Accr4g02708 515 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 MobiDBLite consensus disorder prediction 63 104 - -
Accr4g02708 515 Gene3D WRKY domain 317 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 SUPERFAMILY WRKY DNA-binding domain 161 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 Pfam WRKY DNA -binding domain 331 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 Gene3D WRKY domain 155 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr4g02708 515 FunFam WRKY transcription factor 153 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02708 Accr-Chr4 55666226 55669741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02708 122 403 WRKY Transcription Factor Family AT2G04880 50.685 3.50e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr4g02708 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02708 K18834 - gmx:100781219 449.514