Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02656 ATGAATCAGCTAATTATATTGTTTTTGTCTCTATCAACATTTCATCTATCCATATCAGGAGTAACTTCAACAACATTCATAATAGTTAACAACTGCAACTATACAATATGGCCAGCCATTGTTTCACAAGGTGGTGTCTCTGATATTTCTCCCACCGGTTTTGTTCTTGCTAAGGGAGAGTCTAGGACAATCTCTGTACCCACTTCATGGAGCGGGAGCTTGTGGGGTCGAACAAACTGCGAAACGCACTCCAACGGAACCTTTATCTGTGGAACCGGTGATTGCAGCTCCGGGAAGCTGGATTGCGAAGACAAGGGCAGCGAAGTGAAAGCTACAAGGGTAGAATTCAGTTTAGGCCAAGCCTCAGACCTTGATTCATATTATGTGAACTTAGTCAACGGATACAACGTGCCCATGATGGTTTCTCCTCAAGGCATCAAAAACTGCTACAGGACAGGTTGTACGGAGGATTTAAACAATATATGCCCTCCTGAGCACAGGGCAATTTCCAGCCAAACTGGAAAAACGGCGTTATGCGAAAATGCTTGCAGAATAAATCCCACACAGTACTGTTCAAAGCCAAACAAATACTCAGAGATATTTGACAGTGCATGCCCATTTGCACATTTTTTACCCAACAATAGCAAGGAAAAACCATTCACATGCCCGGCCGCACCAATTTATAGCATAAGCTTTTGTAATCCACCACCCAACCCAGACAAGAGACATTTGATATTCATCATTGTCATTACTAATATTATAGGAGCTATCATTATTAATGGCACTTGTGCATACTTTTTCAGAAAATGGATCGCAAAACATTCAGCAAGAATATGGAAGACCACATGCTTCTTGTTGTTAAAAAAGCAAGGATCATATGTAGAGAAAACAAGTGATAGCAACATTATTGGAGAATTTTCACAAGTAAAATTCCCCCAGGAGTTATTTGTGTATGACTATAACAAGGTTGCAATTGCCACAAACAACTTTCACTTGTCTAATAAACTTGGACTGGGCGGTTTTGGTCTAGTATACAAGGGAACATTACCACATGGTCAGCACGTAGCAATTAAGAGACTATCCAGAGCATCTGGACAGGGACAAGAAGAATTTATGAATGAGATGGTTGTCATTTCGAAGCTTCAACATCGGAATCTTGTAAGACTTTTAGGTTGTTGTGTTGAAGGAGAAGAAAAGATGTTGATCTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCATCAAATCGTAAACTACTCGATTGGGTAAAGCGATTTGGTATAATTGAAGGAATAGCACGTGGAGTACTTTATCTTCATAGAGATTCTAGACTAAAAATTATACATAGGGATCTAAAAGCAAGTAATATATTGCTAGATGAAAATCTTATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTTAAAGAGAGTGAAGATCAAGCTAATACAAAAAGAGTTGTTGGAACCTATGGTTATATGTCACCAGAATATGCAATGGAAGGATACTTTTCAGAGAAATCAGATGTGTTTAGTTTTGGCGTTATACTATTAGAGATTATTAGTGGAAGAAAAAACTCTAGCTTTTATCACAATGAGCATTCTTTGAGCCTTTTAGGATTTGCTTGGAAATTATGGAATGAAAAGAACCTTACATTGTTAATTGATAATGAAATATCCAATCCAAGCCTAGAGAAGGATATAATAAGGTGCATACACATAGGGCTACTATGTGTGCAAGACCTTGCAAGTGAGAGGCCAAATATGAGCATTGTGATTTCTATGTTGAATAGTGACATTGTTAGTTTACTTCCTCCAAGGCAACCTGCGTTTATCCAGTGGCAGAGTAAAGTGAATAATGTACCTATAGCAGAAAATGAAGCAATACTTTCCAACAATGGACTCAGTATTAGTGAGATACGGGGCAGATAG 1947 0.3801 MNQLIILFLSLSTFHLSISGVTSTTFIIVNNCNYTIWPAIVSQGGVSDISPTGFVLAKGESRTISVPTSWSGSLWGRTNCETHSNGTFICGTGDCSSGKLDCEDKGSEVKATRVEFSLGQASDLDSYYVNLVNGYNVPMMVSPQGIKNCYRTGCTEDLNNICPPEHRAISSQTGKTALCENACRINPTQYCSKPNKYSEIFDSACPFAHFLPNNSKEKPFTCPAAPIYSISFCNPPPNPDKRHLIFIIVITNIIGAIIINGTCAYFFRKWIAKHSARIWKTTCFLLLKKQGSYVEKTSDSNIIGEFSQVKFPQELFVYDYNKVAIATNNFHLSNKLGLGGFGLVYKGTLPHGQHVAIKRLSRASGQGQEEFMNEMVVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNKSLDAFIFDPSNRKLLDWVKRFGIIEGIARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKESEDQANTKRVVGTYGYMSPEYAMEGYFSEKSDVFSFGVILLEIISGRKNSSFYHNEHSLSLLGFAWKLWNEKNLTLLIDNEISNPSLEKDIIRCIHIGLLCVQDLASERPNMSIVISMLNSDIVSLLPPRQPAFIQWQSKVNNVPIAENEAILSNNGLSISEIRGR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02656 648 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Accr4g02656 648 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Accr4g02656 648 PRINTS Pathogenesis-related protein signature 224 233 IPR001938 -
Accr4g02656 648 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Accr4g02656 648 Pfam Thaumatin family 30 233 IPR001938 -
Accr4g02656 648 Gene3D Thaumatin 24 234 IPR037176 -
Accr4g02656 648 SMART tha2 26 234 IPR001938 -
Accr4g02656 648 SMART serkin_6 330 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02656 648 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Accr4g02656 648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 406 609 - -
Accr4g02656 648 SUPERFAMILY Osmotin, thaumatin-like protein 24 233 IPR037176 -
Accr4g02656 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 183 644 - -
Accr4g02656 648 Gene3D Transferase(Phosphotransferase) domain 1 406 607 - -
Accr4g02656 648 ProSiteProfiles Thaumatin family profile. 23 233 IPR001938 -
Accr4g02656 648 SUPERFAMILY Protein kinase-like (PK-like) 313 629 IPR011009 -
Accr4g02656 648 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Accr4g02656 648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 295 405 - -
Accr4g02656 648 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Accr4g02656 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Accr4g02656 648 Pfam Protein tyrosine and serine/threonine kinase 331 599 IPR001245 GO:0004672|GO:0006468
Accr4g02656 648 ProSiteProfiles Protein kinase domain profile. 330 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g02656 648 CDD STKc_IRAK 336 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02656 Accr-Chr4 54214832 54217367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02656 283 617 Receptor kinase-like Gene Family AT4G23140 55.718 9.66e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr4g02656 PK_Tyr_Ser-Thr 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02656 - - pcin:129285776 957.592