Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr4g02618 | ATGGAGGTTGTTTTGGCCGCGTCCTCTGTTGATGCTGATATTGGCTGCTGGGACCTTCAGTCAGGGGCTGAGCAGCTGCGCTATAAAACTTGTGCTGCCCCATCACATGGCCTCATTAGTGTTGGTAGTCGCTTCCTTGCATCTTCTCAGATCCGAGATTCCTCTGCTACTGCTGGTCTGGTTCTCTACTGGGACTGGTCCAAGCCTCAAGTAGAAGCCAAGAGCTTTCCAGCTGAGCCAATCAGGCCTCTTGCTGCTAATCACTCAGGCACTTATATAGCTGGTGGTGGTTTATCAGGTGACATATACTTTTGGGAGGTTGAAACTGGCAGATTGCTTAAGAAGTGGCATGCTCATTATATGGGTGTAACTTGCCTAGTATTTTCTGAGGATGACTCACTATTGATATCTGGTTCAGAAGATGGATGCATACGAGTTTGGTCCTTGTTCATGATATTTGATGATTTGAAAAGGAAGGAAGCAGGTCATCTTTATGAGCATAGTTTTTCAGAGCACCCCTTAGAAGTAACTGACATTGTAATTGGTTATGGAGGGTGCAATGCGATTATAATTTCTGCTGCAGAGGATAAGACCTGTAAGGTTTGGAGCTTATCTAGAGGAATGCTACTAAGAAATATCGTATTCCCTTCAGTGATTGATGCAATTGCATTGGATCCTGCTGAACGTGTCTTTTATGCTGGCAGTAGAGATGGAAAAATATTTATTGTCGCTCTTAACACTGAAAGGATGTTTAGTCATAATCATGATATGCATATCATTAGTTCATTCTCTAATCTCAGCAAAGCAGTTACTTGCTTAACATATAGTGCAAGTGGGAATGTGTTAATCTCTGGATCAGAAGATGGAATGGTTCGGCTTTGGAACACAAAAGAAAAACATGCTTTGGAACGCACACTCAAATATGCTAAAGGGCCTGTAAATAATATTCTTGTGGTTAGAAGACAGCTTGACTCAAGCAAGTCTATGTCTTCAACTTTACAATCACCATCCTCAAGAAGGCAGGGATCTTTACTGCCCCCTCCATTGGAAAAATACTCAAATTCAACAACAGATGAAGATTCAGATGTTAAAACTATTGTTAACCTCCATGATGGAAGGAGCGGTGTGGATGTTTCATACATGTCTTCGCAGGTGATATTTAATCAAATCAAGGAATTTCAGAATCGGGGCTCCTCTGCTTCTGAAATGGAGATGGAGAGGCTAAAAATGGATTGCAGGAGGTCTGGTCAGATGGTTGACCGATTTAAGAAAATGTATGAAGATATGCTAGAGTTCTATGAAGACGACTTCTTGAAAGAGGGTCAAACTAAAACTTGA | 1338 | 0.417 | MEVVLAASSVDADIGCWDLQSGAEQLRYKTCAAPSHGLISVGSRFLASSQIRDSSATAGLVLYWDWSKPQVEAKSFPAEPIRPLAANHSGTYIAGGGLSGDIYFWEVETGRLLKKWHAHYMGVTCLVFSEDDSLLISGSEDGCIRVWSLFMIFDDLKRKEAGHLYEHSFSEHPLEVTDIVIGYGGCNAIIISAAEDKTCKVWSLSRGMLLRNIVFPSVIDAIALDPAERVFYAGSRDGKIFIVALNTERMFSHNHDMHIISSFSNLSKAVTCLTYSASGNVLISGSEDGMVRLWNTKEKHALERTLKYAKGPVNNILVVRRQLDSSKSMSSTLQSPSSRRQGSLLPPPLEKYSNSTTDEDSDVKTIVNLHDGRSGVDVSYMSSQVIFNQIKEFQNRGSSASEMEMERLKMDCRRSGQMVDRFKKMYEDMLEFYEDDFLKEGQTKT | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr4g02618 | 445 | SUPERFAMILY | WD40 repeat-like | 5 | 318 | IPR036322 | GO:0005515 | |
Accr4g02618 | 445 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 116 | 149 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | Gene3D | - | 1 | 214 | IPR015943 | GO:0005515 | |
Accr4g02618 | 445 | MobiDBLite | consensus disorder prediction | 327 | 360 | - | - | |
Accr4g02618 | 445 | PANTHER | WD-REPEAT PROTEIN 18 | 2 | 436 | IPR045227 | - | |
Accr4g02618 | 445 | Pfam | WD domain, G-beta repeat | 111 | 148 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | Pfam | WD domain, G-beta repeat | 267 | 295 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | Gene3D | - | 215 | 333 | IPR015943 | GO:0005515 | |
Accr4g02618 | 445 | FunFam | Protein ROOT INITIATION DEFECTIVE 3 | 1 | 242 | - | - | |
Accr4g02618 | 445 | SMART | WD40_4 | 206 | 244 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | SMART | WD40_4 | 109 | 148 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | SMART | WD40_4 | 256 | 295 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | SMART | WD40_4 | 69 | 106 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | SMART | WD40_4 | 162 | 203 | IPR001680 | GO:0005515 | |
Accr4g02618 | 445 | PRINTS | G protein beta WD-40 repeat signature | 190 | 204 | IPR020472 | - | |
Accr4g02618 | 445 | PRINTS | G protein beta WD-40 repeat signature | 135 | 149 | IPR020472 | - | |
Accr4g02618 | 445 | PRINTS | G protein beta WD-40 repeat signature | 282 | 296 | IPR020472 | - | |
Accr4g02618 | 445 | MobiDBLite | consensus disorder prediction | 327 | 354 | - | - | |
Accr4g02618 | 445 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 116 | 149 | - | - | |
Accr4g02618 | 445 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 263 | 295 | - | - | |
Accr4g02618 | 445 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 263 | 304 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr4g02618 | Accr-Chr4 | 52931869 | 52936128 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr4g02618 | 88 | 298 | U-box Gene Family | AT1G04510 | 22.791 | 9.99e-11 | 61.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr4g02618 | K14829 | - | qsa:O6P43_016055 | 610.142 |