Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02575 ATGGGATCTTTGTCTGAGTTTTCGGGTATACAGTTTGATGTCTTCATCAGCTTCAGAGGCACAGACACACGTCAAGGTTTTCTCAGCCATTTGAGAAAGGAACTTAGGCAGAAGCAAATTGAGGCCTATATAGATGACAAACATGAAAGTGGAGATCAATTATCACCTGCGCTTTTAAGAGCTATTAAAGGATCACTTATTTCATTGATAATTTTTTCAAAGGACTATGCTTCTTCAAAGTGGTGCTTAGAAGAACTTGTGCAGATTATTGACTGTATGGAGAAGCAAAAACAGATTATGATTCCCGTTTTCTATAACATAGACCCTTCACATGTGAGACATCAGAAAGGGTCTTATGGAGACGCTCTAGCAGAACATGGCAAACATTATTATAAGGAAAAGTTGGCAATTTGGAGATCATGTTTGAAAGAGGCTGCTAATTTATCTGGGTTTCATTCATCAAATTATGGGGACGAGGCTGAGCTCATTGAAGAAATTGCCAAATCTTTATCCAAAAAGTTAACTATTTTGTACCGAAGTGACTTCACAAATCTTGTTGGAATTGATGAAAGAATTGCAGAATTAGGATCATTAATGGATGGAGGGTCAAAAGATGTTCGTGTCATTGGAATTTGGGGCATGGGCGGTATCGGCAAGACAACTATCGCTGCTGCAATATTCAATAAATTTTGTTTTGAATATGAAGGGCATTGTTTTTTGGCAAACGTGAGGGAAGAAACTGAAAAGAGTGGGATTATTTATTTGAAGAATAAAATACTTTCTTCACTACTCAAAGAGAATGATTTACAAATTAGCACCCCATATGGCATGCCCCCTTTCGTAAGGAGAAGGCTTCTTCGGAAAAGGGTTCTTGTTGTTCTCGATGACATTAGTGACTCAGATCAACTTGAAACTTTAGTAGGAGCACTTGATTGCTTTGGATCTGGGAGCAGAATCTTAATAACAACGAGAGATAAACAAGTGCTTGCTAAAAGAGTTGATGAAATATACGAGGTTAAGCCACTGATGTCTGATGATGCTGCTAGACTTCTTATGTTGAATGCCTTTGACAATACTTATGTAGACATTGAGTGGATTGAATTATCAAGGAAGGTGATTAGTTATGCGAAAGGCATTCCATTGGCCTTGAAAGTTTTGGGTTCCTTTCTTTATGGAAAAAGCAAGGAGGAATGGGAGAGCCAACTTGAGAAGCTAAAAAAAATGCCACATGCAAAAATTCAAGATGTGATGAGATTGAGTTATGATAAACTAGATAGGGAAGAGAAGAACATTTTCTTATATATTGCTTGTTTTTTCAAAGGATATGAAACAGAGCAAATAATACTTCTGTTAAATGCCTGTGGTTTCTCAACAATCATTGGGTTGAAAGTCCTGCTAGACAAAGCTCTTATAACTGGAGTTAAAGAATCAACTGTCAGAAAGGCAAGAATATCTATGCATGATTTAATACAAGAAATGGGTTGGGAAATTGTTCGTGAAGAATCTGTTGATAATCCTGGAAATCGTAGTAGACTATGGGATGCTAATGAGATATGTCATGTATTAAAACATGACATGGGGACTAAAGCCGTTCAAAGCATAACTCTGAATGTGGCAAAAATTGAAGATCTGCATTTAAGTGCAAAAACCTTGTCCTCAATGAACAATCTGAAATTTCTCAATTTTTATAAAGCTAATTTTGGAAATGGGAATTTACATTTTCCCTATGGTGTTGAATTTTTGTCCAATAAGCTTAGACTTTTGCGTTGGGATTACTACCCTTCGAAGTCATTGCCGGCAACATTTTCGGCTGAAAACATTGTTACTATGAAAATGTTCAACAGCAAACTTACAAAACTTTGGGATGGTGTCCAGAACCTCTCGAATTTAAGGGAGATTCTCCTTAGTGAATCAGAGTACCTGGTGGAGCTTCCTGATTTCTCAAAGGCCAAGCTTCTTAGAAATGTAAATCTTAGCTTTTGTACAAGGTTGCGTAGTGTTCACCCATCAATTTTAACTCGACCCAATCTCATCCGTTTAAGGCTTGTAGATTGCAAAGCCCTTACTAGCCTCACCTGCAATACCCCTCTAAAATCACTTACATTTCTCGCACTCAGTGGATGTTCAAGGCTGAGAGAGTTTTCAGTAACGTCAGATAAAAGGTTAGATCTTTTTCTTTCAAACACAGCCATCAATGATGAATTGTGCTCATCAAGCGGGCATCTTGGCAACATTGAAAATTTGAGTGTAGACGGATGCCAGAGTCTCACAAATCTCCCCTACAAGTTAATTGACCTTAGTGGTCTTCGATCTCTTAGTATTTCTGGTTGCAACAAATTAGCATCAAATCTGCATTTCCTATTAGATAGGTTACGCGGTTTGGAAAATTTGTCGCTGAATAATTGCAGCAACTTATATGAACTGCCTGAGAACATCAGCTTGTTGTCATCGTTACGTGAGTTATCACTCACCGGGTCAACTAGTTTGACAACACTGCCTGCGAGCATCAAGCATCTTGTGAGGCTACAACGTGTTAGGTTGGATGGATGCAAAAGGCTTCAATCTCTACCAGAACTTCCACCCTCCATTGAAAACTTGTCTGCAAGGGACTGCACAGTCCTTGAGTCCCTAAAGTTAACTTCAATGCCTACAGTCACATTGGAAGATGAAGTATGCTTCCACTTTGGAAATTGCATGAAATTGGATTGGCAATCAATCAAAGCTATCGAAGCAAAAGCGCTACTTGAGATGGATAAATTTGTATCAGCCGTTGAAAAAGGCAGTTCTTGGACTATGCAAGCTCAACTTGTATATCCGGGGAGCAAAGTTCCCGAGTGGTTCATGTATAAGTCAACTCAGTCTTCTGTCACCATCGATCTCTCCTCCATCCCACAACCTAAGGATTGGATTTTCATCTTTTGCGCCGTTGTTTCTCACCCTCAATCCTTTCTCTACTTTGAAACTGACTGGTATTTTAGTGATGGCCAAGAGGTTTTGGAGGGGATGATGTATTACTTTTGCAGACATATTGGCATCCTCCATACAGATCATGTTTGTCTCTGGTATATCTCGGAGCTTCCTTCAGATGTTCAAAGGATAATTGAGGAGAAGAGTAAAGATAGGATAACCACTAATCATGAATCAGTTGAAATAAAGTTCATTGCTAAAACTCCTGGTCCAGTTCCAGTTTTGGGTCTCAAAGGGTGTGGGGTATGCCCAACAGGTGCATCATCAGGATATCGAAATTATATTCAGCAAATGGAATTGGTTTTACAGTCACAATCTTATTCAGAGGGAACCAAAACCTTTGACAAAGAAGTGGTTCTGAGGAAGTCTAAGGATGTTATCTCCCCAACCCGGCCAACTTTGACTTGGAAGAATCGAACACAGGGCTTGAAAGATATTTTATCTTCCTATGATAACTAG 3426 0.3894 MGSLSEFSGIQFDVFISFRGTDTRQGFLSHLRKELRQKQIEAYIDDKHESGDQLSPALLRAIKGSLISLIIFSKDYASSKWCLEELVQIIDCMEKQKQIMIPVFYNIDPSHVRHQKGSYGDALAEHGKHYYKEKLAIWRSCLKEAANLSGFHSSNYGDEAELIEEIAKSLSKKLTILYRSDFTNLVGIDERIAELGSLMDGGSKDVRVIGIWGMGGIGKTTIAAAIFNKFCFEYEGHCFLANVREETEKSGIIYLKNKILSSLLKENDLQISTPYGMPPFVRRRLLRKRVLVVLDDISDSDQLETLVGALDCFGSGSRILITTRDKQVLAKRVDEIYEVKPLMSDDAARLLMLNAFDNTYVDIEWIELSRKVISYAKGIPLALKVLGSFLYGKSKEEWESQLEKLKKMPHAKIQDVMRLSYDKLDREEKNIFLYIACFFKGYETEQIILLLNACGFSTIIGLKVLLDKALITGVKESTVRKARISMHDLIQEMGWEIVREESVDNPGNRSRLWDANEICHVLKHDMGTKAVQSITLNVAKIEDLHLSAKTLSSMNNLKFLNFYKANFGNGNLHFPYGVEFLSNKLRLLRWDYYPSKSLPATFSAENIVTMKMFNSKLTKLWDGVQNLSNLREILLSESEYLVELPDFSKAKLLRNVNLSFCTRLRSVHPSILTRPNLIRLRLVDCKALTSLTCNTPLKSLTFLALSGCSRLREFSVTSDKRLDLFLSNTAINDELCSSSGHLGNIENLSVDGCQSLTNLPYKLIDLSGLRSLSISGCNKLASNLHFLLDRLRGLENLSLNNCSNLYELPENISLLSSLRELSLTGSTSLTTLPASIKHLVRLQRVRLDGCKRLQSLPELPPSIENLSARDCTVLESLKLTSMPTVTLEDEVCFHFGNCMKLDWQSIKAIEAKALLEMDKFVSAVEKGSSWTMQAQLVYPGSKVPEWFMYKSTQSSVTIDLSSIPQPKDWIFIFCAVVSHPQSFLYFETDWYFSDGQEVLEGMMYYFCRHIGILHTDHVCLWYISELPSDVQRIIEEKSKDRITTNHESVEIKFIAKTPGPVPVLGLKGCGVCPTGASSGYRNYIQQMELVLQSQSYSEGTKTFDKEVVLRKSKDVISPTRPTLTWKNRTQGLKDILSSYDN 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02575 1141 SUPERFAMILY L domain-like 486 902 - -
Accr4g02575 1141 Pfam TIR domain 12 188 IPR000157 GO:0007165
Accr4g02575 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 435 IPR027417 -
Accr4g02575 1141 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Accr4g02575 1141 Gene3D - 342 425 IPR042197 -
Accr4g02575 1141 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 151 IPR035897 -
Accr4g02575 1141 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 777 IPR044974 GO:0006952
Accr4g02575 1141 Gene3D - 178 339 IPR027417 -
Accr4g02575 1141 Gene3D Ribonuclease Inhibitor 722 911 IPR032675 -
Accr4g02575 1141 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 176 - -
Accr4g02575 1141 Pfam NB-ARC domain 197 423 IPR002182 GO:0043531
Accr4g02575 1141 Gene3D - 10 177 IPR035897 -
Accr4g02575 1141 PRINTS Disease resistance protein signature 284 298 - -
Accr4g02575 1141 PRINTS Disease resistance protein signature 208 223 - -
Accr4g02575 1141 PRINTS Disease resistance protein signature 695 711 - -
Accr4g02575 1141 PRINTS Disease resistance protein signature 376 390 - -
Accr4g02575 1141 SMART till_3 11 148 IPR000157 GO:0007165
Accr4g02575 1141 Pfam C-JID domain 938 1033 IPR045344 -
Accr4g02575 1141 Gene3D Ribonuclease Inhibitor 474 721 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02575 Accr-Chr4 51506877 51510555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02575 12 821 WRKY Transcription Factor Family AT4G12020 33.617 5.66e-114 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02575 - - pcin:129290873 1700.64