Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g02571 ATGGGTTATCTATGTGATTTCTGTGGAGAACAGAGGTCCATGGTGTATTGCCGTTCTGATGCTGCATGCTTGTGTTTGTCGTGCGACCGAAATGTTCATTCTGCTAATGCCCTTTCAAGACGTCACTCGAGGACACTAGTATGTGAGAGATGCAATTCACAACCTGCTCTTGCAAGGTGTACTGAAGAGAGGATTTCACTATGCCAGAATTGTGATTGGGTGGGCCACAGTACTTCCACATCTTTGTCAACACATAAGAGGCAAACAATCAATTGCTATTCTGGATGCCCTTCAGCTGCAGAACTTTCTTCAATATGGTCATTTGTCTTGGACATTCCAACTATTGGTGAATCTTCATGTGAGCAAGAACTAGGAATGATGAGTATTAATGAGAACAGCAACAGGAGTGATTGGGTTCCCCCTGAAAGTCAGAATGCGTCTGGTTCAGCTCAAGTAATTGATGTAAACAGCATGGATAAGTCTTGTGTCGGGCAATCTTCAATGCCCGAGACGAGCTTAGAGCCTCGTACTCTAGACTACCCAACTGGACCTGCCAATCAAACTCTATCCAAGCTATACTGCCCTGGTACAAAAGGTTCTGAGCTATATGAAGATGATGACCTGTATGGTGACTTTGACATGGATGAAATGGATCTGAATCTTGAGAAATATGAAGAACTTTTTGGTATGGCTCTTAGTCATTCTGAAGAGCTTTTTGAAAATGGCGGCATTGATAGTTTGTTCGGGACAAAGGAAATATCTGCCGGTGATTCCAATCATCAGGCTGGTGATGAGGGATCGTCAGCTGGACTAGTCAACACACCACATCCAGCGTGCAGCAATGCAGCATCTGCAGATTCCATGCTAAGTACAAAAACCGAACCGATTCTCTGTTTCACGGGAAAGCAAGCGCAATCAAACCTTTCATTTTCTGGTGTTGCCGGAGAGAATAGTGGTGCTGACTATCAAGATTGTGGTGCTTCTTCGATGCTTCTCACAAGGGAGCCTCCGTGGTGCCCTCCATGCCCTGAAAGTTCCCTGAAGGCTTCCAACCGCAGTGATGCTGTCTTGCGTTATAAAGAAAAGAAGAAGACTCGCATGTTTGAAAAAAGAGTGAGGTATGCCTCTCGCAAGGCAAGGGCTGATGTTCGGAGGCGTGTTAAGGGCCGGTTTATTAAAGCTGGTGAAGCCTATGATTACGATCCTTTGAGTGAAACCAGAAGCTACTGA 1230 0.452 MGYLCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLVCERCNSQPALARCTEERISLCQNCDWVGHSTSTSLSTHKRQTINCYSGCPSAAELSSIWSFVLDIPTIGESSCEQELGMMSINENSNRSDWVPPESQNASGSAQVIDVNSMDKSCVGQSSMPETSLEPRTLDYPTGPANQTLSKLYCPGTKGSELYEDDDLYGDFDMDEMDLNLEKYEELFGMALSHSEELFENGGIDSLFGTKEISAGDSNHQAGDEGSSAGLVNTPHPACSNAASADSMLSTKTEPILCFTGKQAQSNLSFSGVAGENSGADYQDCGASSMLLTREPPWCPPCPESSLKASNRSDAVLRYKEKKKTRMFEKRVRYASRKARADVRRRVKGRFIKAGEAYDYDPLSETRSY 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g02571 409 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Accr4g02571 409 SMART bboxneu5 48 90 IPR000315 GO:0008270
Accr4g02571 409 SMART bboxneu5 4 47 IPR000315 GO:0008270
Accr4g02571 409 CDD Bbox1_BBX-like 47 90 - -
Accr4g02571 409 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
Accr4g02571 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 397 - -
Accr4g02571 409 CDD Bbox1_BBX-like 4 47 - -
Accr4g02571 409 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Accr4g02571 409 Pfam CCT motif 352 394 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g02571 Accr-Chr4 51379606 51383430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g02571 1 409 C2C2-CO-like Transcription Factor Family AT3G07650 56.872 9.88e-155 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr4g02571 CCT 3.8e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g02571 - - gmx:100800832 635.18